Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_1140 |
Symbol | gatR |
ID | 4240641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | - |
Start bp | 1279077 |
End bp | 1279868 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638104703 |
Product | galactitol utilization operon repressor |
Protein accession | YP_719352 |
Protein GI | 113461283 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.556636 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACACTT TTGAAAGACG ACATCAAATT ATAGAATTAC TCAAAGAAAA CGGAATTGTG TCCGTCAATG ATCTCGCCAA ACGATTTAAT GTATCGGAAG TTTCTGTGCG TACCGATTTA AGAATGCTGG AAGAACAAGG AATACTTACT CGTTTTCACG GAGGTGCGGC ATTTTCAAAT TCAAATGAAA AGCCATACGA AAAAAAAGAA CGAAACGAAA GTAAAGAGAC TTCACTTGAA GAACGCCATG GTCTTTCGCA CGATCCGAAA TCCCATATTG CCCGTATTGC CGCACAACTG GTTAAGGAAG GTGATACTGT CATTCTTGAC AGCGGCAGCA CTACCTTGAT GATTGCTTAC GAATTACTTA AAATTAAGAA CATTACTGTT ATTACTAACA ATCTTCCTGC TGCAGTAGTA CTATCCGATT CACCTGATAT TACTCTTGTA ATTTGCGGCG GTACGCTTCG TCACAAAACC CGCTCAATGC ACGGTACTAT TACTGAAAAT TCATTACAAG GCATTCGGGC TGATATTATG TTTGTGGGAG CCGATGGTGT TGATGCCAAA ATAGGACTGA CAACCTTTAA TGAGGGCTAC AATATCAGTT CAATTATGGC AGATATTTCC GCCAAAGTAG TAGCTGTTGT TGATGCAACA AAATTCAACC GTAACGGCTT TAACCTTGTA CTTCCAATGC AAAAATTGGA TTTAGTCATT ACAGATAATA GTCTGACAAA GGAAAAACAG CTGGAATTAA TTTCGGTGGG TGTACCGTTA CAGTTAGCCT AG
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Protein sequence | MNTFERRHQI IELLKENGIV SVNDLAKRFN VSEVSVRTDL RMLEEQGILT RFHGGAAFSN SNEKPYEKKE RNESKETSLE ERHGLSHDPK SHIARIAAQL VKEGDTVILD SGSTTLMIAY ELLKIKNITV ITNNLPAAVV LSDSPDITLV ICGGTLRHKT RSMHGTITEN SLQGIRADIM FVGADGVDAK IGLTTFNEGY NISSIMADIS AKVVAVVDAT KFNRNGFNLV LPMQKLDLVI TDNSLTKEKQ LELISVGVPL QLA
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