Gene HS_1098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1098 
SymbolptsH 
ID4240598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1232182 
End bp1232439 
Gene Length258 bp 
Protein Length85 aa 
Translation table11 
GC content38% 
IMG OID638104660 
Productphosphocarrier protein HPr 
Protein accessionYP_719310 
Protein GI113461241 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1925] Phosphotransferase system, HPr-related proteins 
TIGRFAM ID[TIGR01003] Phosphotransferase System HPr (HPr) Family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000161802 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACTCAA AAGATGTTGA AATTACTGCA CCAAATGGTT TACACACTCG TCCAGCTGCA 
CAGTTTGTAA AAGAAGCCAA AGCGTTCGTT TCTGATATTA CAGTAACTTC AGCGGGCAAA
AGTGCTAGTG CAAAGAGTCT ATTTAAGTTA CAAACCTTGG GATTGACTCA AGGTACAGTT
ATTACGATTT CTGCTGATGG TGAAGATGAA CAAAAAGCGG TTGAACACTT AGTTGCATTA
ATTCCTACTC TAGAATAA
 
Protein sequence
MYSKDVEITA PNGLHTRPAA QFVKEAKAFV SDITVTSAGK SASAKSLFKL QTLGLTQGTV 
ITISADGEDE QKAVEHLVAL IPTLE