Gene HS_1096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1096 
Symbolcrr 
ID4240596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1229787 
End bp1230287 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content36% 
IMG OID638104658 
ProductPTS system glucose-specific transporter subunit 
Protein accessionYP_719308 
Protein GI113461239 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2190] Phosphotransferase system IIA components 
TIGRFAM ID[TIGR00830] PTS system, glucose subfamily, IIA component 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.534534 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTTTT TTGATAAATT ATTTGGTTCA AAGGAAAGCA AATCTATTGA TGTTGAAATT 
TATGCACCTA TATCAGGTAC AATTGTAAAT ATTGAGGATG TACCGGATGT GGTTTTCTCT
GAGAAAATAG TAGGTGATGG CATAGCAATT CGTCCTACGG GGAATAAGAT TGTTGCACCT
GTAGATGGAG TAATCGGTAG AATATTTGAA ACTAACCATG CATTTTCAAT AGAGTCCAAA
GATGGCGTTG AGTTATTTGT TCACTTTGGT ATTGATACAG TAGAATTGAA AGGTGAAGGT
TTTACTCGTA TTGTTCAGGA AGGTCAACAA GTAAAACGTG GTGAAACAAT TATTGAATTT
GATTTGGCTT CGTTGGAAGC AAAGGCAAAA TCAGTATTAA CTCCGCTGGT AATTTCAAAT
ATGGATGAAA TTAATAGTAT GGATAAAATG TCTGGCGAGG TCGTGGCTGG CGAGTCAGTT
GTACTCTTGT TGAAAAAATA A
 
Protein sequence
MAFFDKLFGS KESKSIDVEI YAPISGTIVN IEDVPDVVFS EKIVGDGIAI RPTGNKIVAP 
VDGVIGRIFE TNHAFSIESK DGVELFVHFG IDTVELKGEG FTRIVQEGQQ VKRGETIIEF
DLASLEAKAK SVLTPLVISN MDEINSMDKM SGEVVAGESV VLLLKK