Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_1093 |
Symbol | lpdA |
ID | 4240593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | - |
Start bp | 1223377 |
End bp | 1224801 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638104655 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | YP_719305 |
Protein GI | 113461236 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.136846 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAG AGATTAAAAC ACAAGTTGTC GTCTTGGGAG CAGGTCCGGC TGGTTACTCA GCAGCTTTCC GTTGTGCAGA TTTAGGCTTA GAAACTGTTA TTGTAGAGCG ATTTTCGACG CTTGGTGGAG TATGTTTAAA TGTAGGCTGT ATTCCGTCCA AAGCGTTATT GCATGTAGCT AAAGTGATTG AAGAAGCTAA GTCCTTATCC GCTCATGGTA TTGTTTTTGG TGAACCAACA ACGGATATTG ATAAAATTCG TGGTTGGAAA GAAAAAGTAA TTAATCAATT GACTAGCGGT TTAGCCGGTA TGGCTAAACA GCGTAAAGTA CAGGTAGTTA ATGGTTATGG TAAATTCTCA GGACCAAATG CAATTATTGT GGCTGGTGAT GAAGGTGAAA CGAAAATTAC TTTTGATAAT GCAATTATTG CTGCCGGCTC TCGCCCTATT CAGTTACCAT TTATTCCACA TGAAGATCCT CGTATTTGGG ATTCTACTGA TGCGTTAAAG TTAAAAGAAG TACCTGAAAA TCTCTTAATT ATGGGGGGCG GTATCATCGG TCTTGAAATG GGAACGGTTT ATCATGCTTT AGGTTCTAAA ATTGATGTGG TTGAAATGTT TGATCAAGTT ATCCCTGCAG CGGATAAAGA TATGGTTCAA ATTTATACTA AACGCATTGA AAAAAAATTC AATTTATTAC TGGAAACTAA AGTAACTGCT GTTGAAGCAA AAGAAGACGG TATTTATGTA TCAATGGAAG GTAAGGCTGC AAGTGAAACT CGTCGTTATG ATGCAGTATT AGTTGCAATT GGTCGTGTAC CAAATGGTAA ATTAATTGAT GCAGGTATTG CTGGCGTCGA AGTTGATGAT CGTGGCTTTA TTCGCACTGA CAAACAAATG CGTACTAATG TACCTCATAT CTTTGCTATT GGTGATGTTG TTGGTCAGCC AATGCTAGCA CATAAAGGCG TACATGAAGG TCATGTAGCT GCAGAAGTAA TTGCAGGACA AAAACATTAT TTTGATCCGA AAGTTATTCC ATCTATTGCT TATACCGAAC CGGAAGTAGC TTGGGTGGGG AAAACTGAAA AAGAATGTAA AGCTGAAGGG ATTAATTACG AAGTTGCTAA GTTCCCTTGG GCAGCGTCTG GACGTGCAAT TGCATCCGAC TGTGCTGATG GTATGACGAA ATTGATTTTC GATAAAGATA CACATCGTGT TATTGGGGGA GCAATTGTCG GTACTAACGG TGGTGAATTG CTAGGTGAAA TTGGCTTGGC AATTGAAATG GGGTGTGATG CTGAAGATTT AGCACTAACA ATCCATGCTC ATCCAACTTT ACATGAATCT GTTGGGCTAG CCGCTGAAGT TTTTGAAGGC TCTATCACAG ATTTACCTAA CCCAAAAGCG AAGAAGAAAA AATAA
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Protein sequence | MNKEIKTQVV VLGAGPAGYS AAFRCADLGL ETVIVERFST LGGVCLNVGC IPSKALLHVA KVIEEAKSLS AHGIVFGEPT TDIDKIRGWK EKVINQLTSG LAGMAKQRKV QVVNGYGKFS GPNAIIVAGD EGETKITFDN AIIAAGSRPI QLPFIPHEDP RIWDSTDALK LKEVPENLLI MGGGIIGLEM GTVYHALGSK IDVVEMFDQV IPAADKDMVQ IYTKRIEKKF NLLLETKVTA VEAKEDGIYV SMEGKAASET RRYDAVLVAI GRVPNGKLID AGIAGVEVDD RGFIRTDKQM RTNVPHIFAI GDVVGQPMLA HKGVHEGHVA AEVIAGQKHY FDPKVIPSIA YTEPEVAWVG KTEKECKAEG INYEVAKFPW AASGRAIASD CADGMTKLIF DKDTHRVIGG AIVGTNGGEL LGEIGLAIEM GCDAEDLALT IHAHPTLHES VGLAAEVFEG SITDLPNPKA KKKK
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