Gene HS_1088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1088 
SymbolrpsB 
ID4240588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1218833 
End bp1219552 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content39% 
IMG OID638104650 
Product30S ribosomal protein S2 
Protein accessionYP_719300 
Protein GI113461231 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0052] Ribosomal protein S2 
TIGRFAM ID[TIGR01011] ribosomal protein S2, bacterial type 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0768857 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACAAG TTTCAATGCG TGATATGCTG CAAGCTGGCG TTCACTTCGG TCACCAAACT 
CGTTACTGGA ACCCAAAAAT GAAACCGTTC ATTTTCGGAC CTCGTAATGG TGTTCACATC
ATCAACTTAG AAAAAACTGT CCCAATGTTC AATGAAGCGT TAGTTGAATT AACTCGTATT
GCGAGTAATA ACGGCAGAAT TTTATTTGTT GGTACAAAAC GTGCAGCTTC TGAAGTTGTT
AAAGCAGCAG CATTAGACTG TCAACAATAT TATGTAAATC ACCGTTGGTT AGGCGGGATG
TTGACAAACT GGAAAACAGT GCGTCAATCA ATCAAACGTT TAAAAGATTT AGAAACCCAA
TCTCAAGATG GTACTTTTGA TAAATTAACG AAAAAAGAAG CGTTAGTACG TACTCGTGAG
ATGGAAAAAC TTGAATTAAG TCTTGGCGGT ATCAAAGATA TGGGCGGTCT TCCTGATGCA
ATTTTTGTGA TCGGTGCAGA TCATGAACAT ATCGCAATCA AAGAAGCAAA TAATCTAGGA
ATCCCTGTAT TTGCAATTGT TGATACTAAC TCAAGCCCAG ATGGCGTAGA TTTTGTTATT
CCAGGTAACG ATGATGCGTC ACGTGCAATT CAATTATATC TTTCTGCAGC TACCACAGCA
GTAAAAGAAG GTCGTAATCA AGAAACGGTA ACTGAAGAAG TTTTTGCAGC AGCAGAATAA
 
Protein sequence
MAQVSMRDML QAGVHFGHQT RYWNPKMKPF IFGPRNGVHI INLEKTVPMF NEALVELTRI 
ASNNGRILFV GTKRAASEVV KAAALDCQQY YVNHRWLGGM LTNWKTVRQS IKRLKDLETQ
SQDGTFDKLT KKEALVRTRE MEKLELSLGG IKDMGGLPDA IFVIGADHEH IAIKEANNLG
IPVFAIVDTN SSPDGVDFVI PGNDDASRAI QLYLSAATTA VKEGRNQETV TEEVFAAAE