Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_1088 |
Symbol | rpsB |
ID | 4240588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 1218833 |
End bp | 1219552 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638104650 |
Product | 30S ribosomal protein S2 |
Protein accession | YP_719300 |
Protein GI | 113461231 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0052] Ribosomal protein S2 |
TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0768857 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACAAG TTTCAATGCG TGATATGCTG CAAGCTGGCG TTCACTTCGG TCACCAAACT CGTTACTGGA ACCCAAAAAT GAAACCGTTC ATTTTCGGAC CTCGTAATGG TGTTCACATC ATCAACTTAG AAAAAACTGT CCCAATGTTC AATGAAGCGT TAGTTGAATT AACTCGTATT GCGAGTAATA ACGGCAGAAT TTTATTTGTT GGTACAAAAC GTGCAGCTTC TGAAGTTGTT AAAGCAGCAG CATTAGACTG TCAACAATAT TATGTAAATC ACCGTTGGTT AGGCGGGATG TTGACAAACT GGAAAACAGT GCGTCAATCA ATCAAACGTT TAAAAGATTT AGAAACCCAA TCTCAAGATG GTACTTTTGA TAAATTAACG AAAAAAGAAG CGTTAGTACG TACTCGTGAG ATGGAAAAAC TTGAATTAAG TCTTGGCGGT ATCAAAGATA TGGGCGGTCT TCCTGATGCA ATTTTTGTGA TCGGTGCAGA TCATGAACAT ATCGCAATCA AAGAAGCAAA TAATCTAGGA ATCCCTGTAT TTGCAATTGT TGATACTAAC TCAAGCCCAG ATGGCGTAGA TTTTGTTATT CCAGGTAACG ATGATGCGTC ACGTGCAATT CAATTATATC TTTCTGCAGC TACCACAGCA GTAAAAGAAG GTCGTAATCA AGAAACGGTA ACTGAAGAAG TTTTTGCAGC AGCAGAATAA
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Protein sequence | MAQVSMRDML QAGVHFGHQT RYWNPKMKPF IFGPRNGVHI INLEKTVPMF NEALVELTRI ASNNGRILFV GTKRAASEVV KAAALDCQQY YVNHRWLGGM LTNWKTVRQS IKRLKDLETQ SQDGTFDKLT KKEALVRTRE MEKLELSLGG IKDMGGLPDA IFVIGADHEH IAIKEANNLG IPVFAIVDTN SSPDGVDFVI PGNDDASRAI QLYLSAATTA VKEGRNQETV TEEVFAAAE
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