| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1087 |
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| Symbol | ppiD |
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| ID | 4240587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | + |
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| Start bp | 1216722 |
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| End bp | 1218578 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 638104649 |
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| Product | peptidyl-prolyl cis-trans isomerase D |
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| Protein accession | YP_719299 |
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| Protein GI | 113461230 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0366769 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAATGG AAAAATTGAA CAATGCCTCT AGCGGTATAG TTTCTAAAAT TATTTTTGGC
TTAATCGGGG TTTCTTTTGT ACTCAGTGGC GTAGCAGGTT ATATGTTTAT ACGGACAGAT
ACATCTGTAG CAAAAGTAAA TGGCGAAGAA ATTTCTCAAC AAGTTTTTCT ACAGCAATAT
AACAATGAAT ATCAACGTTT AAGTGAAAAT TTAGGAGCTA AATTTGCTGA AGTTGCAGAT
TCGGCAGCTA AACATCTAAG ACATGAAGTT CTCGATCGTT TAATCAATCA AGAATTATTA
CGTCAATATG CACAAGAACT TAAGTTAGGA ATTAGCGATA AGCAAGTAAG TTTAGCTATT
GTGAACTCAC CTATGTTTCA AAATGAGGGC AAATTTGACA ATAAAATTTA TCAGCAGATA
TTAGCTTCAA GTGGTATTAG TTCTGATACT TATGCTGCAT ATGTGCGTGA AGGCTTGGTA
TTAGAGCAAT TGCAGCAAGG TATTGCAAAT AGTGATTTTC AGGTTCCTAT ACAACTCAAT
GAATTAGCAA AGAATTTTTT CCAACGTCGT GATGTTCGTT TAGCTGTTCT ATCTTTAGAT
GACGAAATGC AAAAACAAAC TGTAACGGAG CAAGAAATCG AACAATATTA TCAAGCTAAC
AAAGCTAACT TTGCTGTACC TGAAAGAGTT AAAGTGCAAT ATCTAGACTT AACTCGTGCG
ATTGCGGATC AGAAAGTAAA AATCTCCGAT ATAGAAATTG CACAATATTA TCAAGATAAT
AAAGCTCAAT ATATAACAAA ACATTTAGCT CATATTCAAT TACCGACTGA ACAAGAAGCA
CAATCAGTTT ATGCTAATTT ACAAAATGGC GAAGATTTTG CTGCTTTAGC AAAATTATAT
TCAATGGACA CATTGTCAGC CCCAAAAGGT GGAGATTTGG ATTGGGTTGT GAATGGAATG
ATGCCTCTTG CTTTTGAAAG TGCTGTGACG TTATTAAATG TTGGTGAGTA TAGCCAACCT
GTGAAAGTGG ATAATGCGTA CCATATCATT AAAGTATTGG ATATGAAAAC CCGTGAATTA
AATGATGTTA GAGAGGAAAT TGCAACTAAA TTGCGTAATG ATTTAGTAAC AAATGCTTTT
TATTCATTAG AAAAACAAAT GAATGAAAAG GCGTTTGAAA ATCCGCAATC ATTAGAAGAA
GCAGCTAAAG TAGCTGGGCT TGACATCAAA GAAACAGATT ATTTTTCTCG TCAAGATTTA
CCGCCAGAAT TAAATTATAG TCATATTGCT ACCGCCATTT TTAATTCTGA TCTTATGCAA
GGCGGTATAA ACTCAGAGGC AATCAATGTT GGCGATCAAC ATTCCGTGCT TCTGCGTGTA
GTTGATTATA AACCTGAGGG TATTCGTACA CTAGCTGAGG CAACAGCAGA TATTGAAACT
TATTTAAAAC GTCAGAAAGC CGAAACTACG TTGTTTAATA TGGCAGAGAA AATCGTTGCA
GAGATGAATA CAATAACTGA TTTCAAATTA CCGTCTTATA TTCATTTTTC AGAAAAAGAA
ACGTGGGTTT ATAGAGATGC AGATAATAAA GATCCTGTTT TAGGCAAAGT GATATTCTCA
ATGAAAAAAC CTGACCCGGG CAAAACAACC ATATCTGTAG CGAAAAATAT GTTTGGAGAT
ATTGTTTTTG TTGAGTTAAT GAACGTAGAA GATAGCCAAT TAACGCCTGA GCAAAAACAA
TTATTTGGCG TTCAAATAGC AGAAATTAAG CAATTTAGTT TAAGCAATTT GCTTATTCAA
GCCTTAAGAG AAAAAGCCAG TATTGAAATT AATACAAAAT TCATTAATGA AGAGTAA
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| Protein sequence | MLMEKLNNAS SGIVSKIIFG LIGVSFVLSG VAGYMFIRTD TSVAKVNGEE ISQQVFLQQY
NNEYQRLSEN LGAKFAEVAD SAAKHLRHEV LDRLINQELL RQYAQELKLG ISDKQVSLAI
VNSPMFQNEG KFDNKIYQQI LASSGISSDT YAAYVREGLV LEQLQQGIAN SDFQVPIQLN
ELAKNFFQRR DVRLAVLSLD DEMQKQTVTE QEIEQYYQAN KANFAVPERV KVQYLDLTRA
IADQKVKISD IEIAQYYQDN KAQYITKHLA HIQLPTEQEA QSVYANLQNG EDFAALAKLY
SMDTLSAPKG GDLDWVVNGM MPLAFESAVT LLNVGEYSQP VKVDNAYHII KVLDMKTREL
NDVREEIATK LRNDLVTNAF YSLEKQMNEK AFENPQSLEE AAKVAGLDIK ETDYFSRQDL
PPELNYSHIA TAIFNSDLMQ GGINSEAINV GDQHSVLLRV VDYKPEGIRT LAEATADIET
YLKRQKAETT LFNMAEKIVA EMNTITDFKL PSYIHFSEKE TWVYRDADNK DPVLGKVIFS
MKKPDPGKTT ISVAKNMFGD IVFVELMNVE DSQLTPEQKQ LFGVQIAEIK QFSLSNLLIQ
ALREKASIEI NTKFINEE
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