| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1075 |
|---|
| Symbol | serS |
|---|
| ID | 4240574 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | + |
|---|
| Start bp | 1191644 |
|---|
| End bp | 1192933 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 638104636 |
|---|
| Product | seryl-tRNA synthetase |
|---|
| Protein accession | YP_719287 |
|---|
| Protein GI | 113461218 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0172] Seryl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0171622 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGATC CAACTTTATT ACGCAATAAT CTTTCTGAAA TTGCGGAAAA ATTAAAAGTA
AGACGTGGCT TTATTCTCGA CGTAAATAAA TTTTCACAAT TAGAAGAACA ACGTAAGACT
TTACAAATTA AAACGGAAAC TTTACAAGCC GAACGTAACT CTCGCTCAAA AACAATTGGT
GCGGCAAAAG CCAGAGGAGA AGATATTTCT ACTTTATTGG CAGAAGTTGA TCATATGGGA
GCCGAATTAA ATACTGTCAA AGAAGAATTA GCGAATGTAT TAACGGAAAT TGAGCAATTG
GCATTAACAA TTCCCAATAT TCCTGCTGAT GAAGTACCTT TAGGAAAAGA TGATTCTGAT
AATAAAGAAG TTTTTCGTTG GGGAACACCA AAAAAATTTG ATTTTGAAGT GAAAGATCAT
GTTGCCTTAG GGGAAATATT AGGTGGGTTA GATTTTGCTG CTGGTGTTAA ATTAAGTGGT
GCTCGTTTTG CCGTAATAAA AGGGCAAATT GCAAGAATGC ATCGAGCCTT GGCACAGTTT
ATGCTAGATT TACATACTGA GCAACATGGC TATACAGAGG CTTATGTACC TTATTTAGTC
AATCATGCAA CACTTTATGG AACGGGGCAG TTACCAAAAT TTGGTGAGGA GTTATTTCAT
ATAAAACCCC TAGAAAATGA ACAGACTTAT GCGTTAATCC CTACCGCCGA AGTGCCTGTA
ACAAACTTAG TTCGAGATGA AATCATCGAT GAAGCTGATT TACCAATAAA AATGACCGCA
CATACGCCTT GTTTCCGTTC TGAAGCAGGT TCTTACGGTC GTGATACTCG AGGTTTAATC
CGTATGCATC AATTTGATAA GGTTGAATTA GTACAAATTG TTGAACCGGA AAAATCAATG
GAAGCACTGG AAGAATTGAC AAATCAGGCA GAAAAAGTAT TACAACTTTT AAATTTACCT
TATCGTAAAG TTTTATTGTG TACAGGCGAC ATGGGATTCG GAGCTACTAA AACATATGAT
TTGGAAGTAT GGATTCCGGC ACAAAATACG TATCGTGAAA TTTCTTCTTG CTCAAATATG
TGGGATTTCC AAGCACGTCG TATGCAAGCC CGTTGTCGTG CAAAAGGCGA TAAAAAAACA
CGCTTAGTAC ATACTTTAAA TGGATCGGGA CTAGCTGTTG GTCGCACTTT AGTTGCCATT
CTTGAAAATT ATCAAAATGC AGATGGCTCT ATTACCGTAC CGGAAGTATT ACGCCCTTAT
ATGAATGGAA TAGAAATTAT TGGTAAATAA
|
|---|
| Protein sequence | MIDPTLLRNN LSEIAEKLKV RRGFILDVNK FSQLEEQRKT LQIKTETLQA ERNSRSKTIG
AAKARGEDIS TLLAEVDHMG AELNTVKEEL ANVLTEIEQL ALTIPNIPAD EVPLGKDDSD
NKEVFRWGTP KKFDFEVKDH VALGEILGGL DFAAGVKLSG ARFAVIKGQI ARMHRALAQF
MLDLHTEQHG YTEAYVPYLV NHATLYGTGQ LPKFGEELFH IKPLENEQTY ALIPTAEVPV
TNLVRDEIID EADLPIKMTA HTPCFRSEAG SYGRDTRGLI RMHQFDKVEL VQIVEPEKSM
EALEELTNQA EKVLQLLNLP YRKVLLCTGD MGFGATKTYD LEVWIPAQNT YREISSCSNM
WDFQARRMQA RCRAKGDKKT RLVHTLNGSG LAVGRTLVAI LENYQNADGS ITVPEVLRPY
MNGIEIIGK
|
|---|
| |