Gene HS_1059 details

Gene Information

• Locus tag: HS_1059
• Symbol: rnfA
• ID: 4240557
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: +
• Start bp: 1173363
• End bp: 1173944
• Gene Length: 582 bp
• Protein Length: 193 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 638104620
• Product: Na(+)-translocating NADH-quinone reductase subunit E
• Protein accession: YP_719271
• Protein GI: 113461202
• COG category: [C] Energy production and conversion
• COG ID: [COG4657] Predicted NADH:ubiquinone oxidoreductase, subunit RnfA
• TIGRFAM ID: [TIGR01943] electron transport complex, RnfABCDGE type, A subunit

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATAGATT ATATTTTACT GATTATTAGT ACCGCACTGA TTAATAACTT TGTTCTAGTT 
AAATTCTTAG GACTTTGTCC GTTTATGGGC GTTTCAAAAA AAATTGAAAC CGCTATTGGT 
ATGGGATTAG CAACAATGTT TGTACTTACT GTTGCCTCGT TGTGTGCTTA TTTAGTCGAG 
CATTATTTGC TTACTCCACT CCATGCAAAT TTCTTACGCA CCTTGATTTT TATTCTTGTT 
ATCGCCGTTG TTGTGCAATT TACTGAAATG GTCATTCATA AAACGAGCCC AACACTTTAT 
CGTTTACTAG GTATTTTTCT CCCTTTGATT ACCACTAATT GTGCAGTTCT TGGGGTTGCA 
CTGCTTAATA TAAACTTAGC TCATAACTTA ACTCAATCCG TCATTTATGG ATTTTCTGCG 
TCGCTTGGTT TTTCTCTTGT TCTAGTTTTA TTTGCCGCTT TGCGTGAACG CCTTACTGCG 
GCAGATATTC CACTTCCCTT TCGAGGAGCC TCTATTGCGT TAATTACCGC AGGATTGATG 
TCTCTTGCTT TTATGGGCTT TTCCGGTTTA GTGAGAGTGT AA 

 

Protein sequence

MIDYILLIIS TALINNFVLV KFLGLCPFMG VSKKIETAIG MGLATMFVLT VASLCAYLVE 
HYLLTPLHAN FLRTLIFILV IAVVVQFTEM VIHKTSPTLY RLLGIFLPLI TTNCAVLGVA 
LLNINLAHNL TQSVIYGFSA SLGFSLVLVL FAALRERLTA ADIPLPFRGA SIALITAGLM 
SLAFMGFSGL VRV