Gene HS_1011 details

Gene Information

• Locus tag: HS_1011
• Symbol: thiQ
• ID: 4240504
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: -
• Start bp: 1114490
• End bp: 1115134
• Gene Length: 645 bp
• Protein Length: 214 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 638104567
• Product: thiamine ABC transporter, ATP-binding protein
• Protein accession: YP_719222
• Protein GI: 113461154
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG3840] ABC-type thiamine transport system, ATPase component
• TIGRFAM ID: [TIGR01277] thiamine ABC transporter, ATP-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.805933
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTAAAT TAAACACTAT TTTTGATTAT CCCAATATTT CTCTGCACTT TGATTTACAT 
ATAAGTCTAG GCGAAAAGAT TGCTATTATT GGTGAAAGCG GAGCGGGAAA AAGTACATTG 
CTAAACTTAA TTGCAGGATT TGAGCCGGTT AAGCAAGGGG AAATCCGGCT AAATGGTGAA 
AATCATACTT ATACCGCACC ACATCAACGC CCTGTTTCCA TTTTGTTTCA AGAGCATAAT 
TTATTTACTC ATTTAACGGT ATGGCAAAAT ATTGCTATCG GTTTAAGAGC GGATTTGAAG 
TTGAGCAAAG AAGAAATCAA ACAACTGGAA AAAGTAGCAA GTGCGGTAGG TTTAACGGAT 
TTTTTATCAC GTTTACCTAA AGAATTGTCG GGAGGGCAAC GACAGAGAGT TGCTCTAGCG 
AGATGTTTGT TACGAGATAA ACCGATTTTA TTACTTGATG AACCTTTTTC AGCGTTAGAT 
CCTCATTTAC GTCAGGAAAT GTTGACATTG ATTGATAAGT TCTGTAGAGA AAAACAATTA 
ACGTTATTAT TGGTTACTCA TCAACTGAGC GAAGTGATAG ATAAAATTGA TCGCATAGTT 
GAAATAAAAA ATGGTCAAGC AACAGAGAGG GAAATTCCTC GTTGA 

 

Protein sequence

MIKLNTIFDY PNISLHFDLH ISLGEKIAII GESGAGKSTL LNLIAGFEPV KQGEIRLNGE 
NHTYTAPHQR PVSILFQEHN LFTHLTVWQN IAIGLRADLK LSKEEIKQLE KVASAVGLTD 
FLSRLPKELS GGQRQRVALA RCLLRDKPIL LLDEPFSALD PHLRQEMLTL IDKFCREKQL 
TLLLVTHQLS EVIDKIDRIV EIKNGQATER EIPR