| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0994 |
|---|
| Symbol | ppc |
|---|
| ID | 4240487 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | + |
|---|
| Start bp | 1096112 |
|---|
| End bp | 1098751 |
|---|
| Gene Length | 2640 bp |
|---|
| Protein Length | 879 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 638104550 |
|---|
| Product | phosphoenolpyruvate carboxylase |
|---|
| Protein accession | YP_719205 |
|---|
| Protein GI | 113461137 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2352] Phosphoenolpyruvate carboxylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCAAA AATACTCAAC GCTAAAAAAT AACATAAATA TGTTAGGCCA CTTTTTAGGC
GAAACAATCA GCGATGCACA GGGTAGTGAT ATTCTTGATT TGATTGAAAA TATTCGTGTA
TTATCTCGCG ACTCTCGTTC CGGTGATGAA AAAGCACGGG AAAAATTATT AGATACGCTT
TCGACTATTT CCAATGAAAA TATTATTCCA GTAGCTCGTG CTTTTAGTCA ATTTTTGAAT
TTAACCAATA TAGCGGAACA ATACCAAACA ATCTCACGAA AACACATAGA CCAAGTTGCC
TCCGATCGTT CTTTAGAGGC ACTCTTTGAA CGCTTAAAAG CACAAAATGT ACCGGCAGAA
AAAGTCATCT CAACAGTAGA AAAATTATTA ATTGAATTAG TTTTAACCGC CCATCCGACA
GAAGTTACCC GCCGTTCTCT TTTACATAAA TATGTAGAAA TTAACCGCTG TTTAAGCCGT
TTGGAACACG ATGATCTTAC TCAATCAGAA AGCACAAAAT TAAAACGCCG TTTAATGCAA
TTAATTGCAC TTGCTTGGCA TACAAATGAA ATCCGTACGC AACGCCCTAC TCCTGTTGAT
GAAGCAAAAT GGGGGATAGC GGTAATTGAA AACAGCTTAT GGAAAGCCGT GCCTGATTTT
TGTCGTCAAT TGAATCTCCA TTTAGAGAAA AATTTTGGTG TACAACATTC AGTAAACTTA
GCACCTGTCA AATTTTCTTC TTGGATAGGG GGAGATCGTG ATGGTAATCC ATTTGTTACC
GCAGAGACAA CTCGCCAAGT TTTAATCATG AACCGCTGGA AAGCGGCAGA ATTGTTTTTA
GCGGATATTC AAGTTTTATC AGAGGAACTT TCTGTAGTTC ATTGCACTGA GGAATTCCGT
GCCAAATACG GTGATCATTT AGAACCCTAT CGTGTAGTCG TTAAAAATTT GCGAGCAAAA
CTGGTAAAAA CTGTCGCTTA TTACGGTGAA ATTTTAGAAA ATAAACCTTC AACCATCAAT
ACAAATGACA TTTTGACCGA TGATCAACAA CTTTGGGAAC CGCTTTACGA TTGTTATCAA
TCTTTACATC AATGCGGTAT GCGAATTATT GCTAACGGTA TATTGCTGGA TTGTTTACGT
CGTATTCGTT GCTTTGGTCT CTCTTTGTCT CATTTGGATA TTCGTCAAGA AAGCCTTCGT
CATACTAAGG CTCTCTCTGA AATTACTCGT TATATTGGTT TAGGCGACTA TTCACAATGG
ATGGAAGATG ATAAACAAGC TTTTTTAATC CGTGAATTAA GCTCTCGTCG TCCTTTGCTA
CCTCGCAACT GGACGCCTTC TCTGGAAACG CAAGAAATTT TAGAGACTTG TCGAGTTATT
GCACAACAAC CTGAAGGCGT TATATCTTGC TATATTATTT CTATGGCTCG CACTGCCTCA
GATGTGCTTG CAGTTCACTT ATTATTAAAA GAAGCTGGCG TAACCTATTA TTTACCCGTA
GTTCCTCTTT TTGAAACCCT AGATGACCTC AATGCTTCTA AAGAAGTTAT GACTCAATTA
TTTAATGTAG GCTGGTATCG TGGTGTGATC AACAATAAAC AAATGGTCAT GATTGGTTAT
TCCGATAGTG CGAAAGATGC AGGTATGATG GCTGCTTCTT GGGCACAGTA TCGAGCACAA
GAACAACTGG TAAATCTTTG CGAAAAAATG GGCGTAGAAT TAACCTTGTT CCATGGTCGA
GGTGGTACTA TTGGACGTGG AGGTGCACCT GCTCATGCCG CACTTCTATC TCAGCCACCC
CGCTCATTGA AAAATGGTCT ACGTGTAACA GAACAGGGAG AAATGATCCG TTTTAAACTG
GGTCTACCTG CAGTTGCAGT AAATAGCTTT GATCTTTATG CCAGTGCAAT TTTAGAAGCC
AACCTGCTTC CACCTCCGGA GCCTAAAGAA AGCTGGCGTG CAATTATGAA TGAATTATCC
GATTCATCAT GTAATATATA TCGTAGCGTT GTACGTGGAG ATAAAGATTT TGTACCTTAT
TTCCGTTCCG CCACACCTGA ACAAGAATTA TCTAAGTTAC CTCTAGGCTC TCGCCCATCC
AAACGTAATC CGAACGGTGG GGTAGAAAGT TTACGTGCAA TTCCTTGGAT CTTCGCTTGG
ATGCAAAATC GCTTAATGTT ACCGGCTTGG TTAGGTGCAA GTGCGTCTAT TCGTCAATCA
ATTGAAAAAG GCAATAAAGA AACCATTGAA GAAATGTGTA AAAATTGGCC GTTTTTCTCT
ACCCGTATCG GTATGTTGGA AATGGTGTTC AGCAAAACTG ATACGTGGTT ATCTGAGCAT
TATGATCTGA ACTTGGTTAA AAAAGAATTA TGGTATTTAG GTCAATCTTT GCGTGAACAA
CTGCAAGCCG ATATTAAAAC TATTCTTTCT TTATCTCATG AAGATGAATT AATGTCTGAT
TTACCTTGGA TTGCAGAATC CATTGCCTTA CGTAATATCT ATACCGATCC GCTCAACTTA
CTACAAGTAG AACTGTTGCG ACGTTTACGT GAAAACCCTG AAAATCCAAA TCCTGATGTG
GAACAAGCAT TAATGATTAC GATTACAGGT ATCGCTGCAG GTATGCGTAA TACTGGTTAG
|
|---|
| Protein sequence | MPQKYSTLKN NINMLGHFLG ETISDAQGSD ILDLIENIRV LSRDSRSGDE KAREKLLDTL
STISNENIIP VARAFSQFLN LTNIAEQYQT ISRKHIDQVA SDRSLEALFE RLKAQNVPAE
KVISTVEKLL IELVLTAHPT EVTRRSLLHK YVEINRCLSR LEHDDLTQSE STKLKRRLMQ
LIALAWHTNE IRTQRPTPVD EAKWGIAVIE NSLWKAVPDF CRQLNLHLEK NFGVQHSVNL
APVKFSSWIG GDRDGNPFVT AETTRQVLIM NRWKAAELFL ADIQVLSEEL SVVHCTEEFR
AKYGDHLEPY RVVVKNLRAK LVKTVAYYGE ILENKPSTIN TNDILTDDQQ LWEPLYDCYQ
SLHQCGMRII ANGILLDCLR RIRCFGLSLS HLDIRQESLR HTKALSEITR YIGLGDYSQW
MEDDKQAFLI RELSSRRPLL PRNWTPSLET QEILETCRVI AQQPEGVISC YIISMARTAS
DVLAVHLLLK EAGVTYYLPV VPLFETLDDL NASKEVMTQL FNVGWYRGVI NNKQMVMIGY
SDSAKDAGMM AASWAQYRAQ EQLVNLCEKM GVELTLFHGR GGTIGRGGAP AHAALLSQPP
RSLKNGLRVT EQGEMIRFKL GLPAVAVNSF DLYASAILEA NLLPPPEPKE SWRAIMNELS
DSSCNIYRSV VRGDKDFVPY FRSATPEQEL SKLPLGSRPS KRNPNGGVES LRAIPWIFAW
MQNRLMLPAW LGASASIRQS IEKGNKETIE EMCKNWPFFS TRIGMLEMVF SKTDTWLSEH
YDLNLVKKEL WYLGQSLREQ LQADIKTILS LSHEDELMSD LPWIAESIAL RNIYTDPLNL
LQVELLRRLR ENPENPNPDV EQALMITITG IAAGMRNTG
|
|---|
| |