Gene HS_0925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0925 
SymbolpdxA 
ID4240418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1018906 
End bp1019907 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content38% 
IMG OID638104481 
Product4-hydroxythreonine-4-phosphate dehydrogenase 
Protein accessionYP_719136 
Protein GI113461068 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1995] Pyridoxal phosphate biosynthesis protein 
TIGRFAM ID[TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000592654 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCTA TTTTAGGAAT TACGATGGGA GATGCCGCAG GTATCGGCCC AGAAGTTATT 
ATTAAAGCAT TGGCTGATAA ACGGATTTAT GAGTTAGCAC ACCCAGTTGT TATCGGCGAT
CAAAAAATTA TGCAACGAGC TTTACCTATT GTTCATTCAG AACTGAAATT AAGAATATTA
AATGATCTAG ATAGCTTTAC GGCAGAGTAT GGTGTTATTG ATATTTTAGA TTTGAATAAC
TTATCAGAAG ATTTGCCTTT TGCTCAAATT GATCCTCGTG CTGGTAAAGC GGCTTATGAA
TACATCGAAA AAGCCGTTAA GTTAGCGATG GAAGGGAAAA TCCAAGCTAT TGTTACAGCC
CCTTTAAATA AAGAGGCATT ACATGCAAGT GGTAAAATGT TTCCCGGTCA TACTGAAATT
TTAGCTACCC TTAGTAATAC TAAAGATTAC TCAATGATGC TAACCAGCGA AAAACTCAAC
GTTATTCACG TTACTACTCA CGTCCAACTC CGTAAAGCTT GTGATTTAGT TACTAAAGAA
CGAGTTGCCA CTGTTATTGA TTTGGCAGAA GAAAATGCTC GTATTCTTGG TTTTAAAGAG
CCTCGTATTG CTGTTGCCGG TTTAAACCCT CATTCTGGTG AAAATGGAAT GTTTGGTGAT
GAAGATCAAA AAGAAATCGT ACCTGCAATT CTAGCAGCTC AAGCCAAAGG ATTTAATGTT
ACAGGACCTA TACCACCGGA TACTTTATTT CATCGTGCAG CTAATCTAAA CGAGTTCGAT
ATTGTCGTCG TGATGTACCA CGATCAAGGA CATATCCCTA TCAAATTATT AGGTTTTGAT
ACTGGTGTAA ATGTTACTGT TGGTCTTCCA TTTATTCGAA CATCTGTCGA TCACGGCACT
GCATTTCCGA TTGCAGGAAA GGGAGTTGCC GATAGCCGTA GTATGACTGA AGCACTCTAT
CTAGGTGCAA AAATGGCAAA CATCAAATAT GCAACACACT AA
 
Protein sequence
MKPILGITMG DAAGIGPEVI IKALADKRIY ELAHPVVIGD QKIMQRALPI VHSELKLRIL 
NDLDSFTAEY GVIDILDLNN LSEDLPFAQI DPRAGKAAYE YIEKAVKLAM EGKIQAIVTA
PLNKEALHAS GKMFPGHTEI LATLSNTKDY SMMLTSEKLN VIHVTTHVQL RKACDLVTKE
RVATVIDLAE ENARILGFKE PRIAVAGLNP HSGENGMFGD EDQKEIVPAI LAAQAKGFNV
TGPIPPDTLF HRAANLNEFD IVVVMYHDQG HIPIKLLGFD TGVNVTVGLP FIRTSVDHGT
AFPIAGKGVA DSRSMTEALY LGAKMANIKY ATH