Gene HS_0848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0848 
Symbol 
ID4240340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp926305 
End bp927234 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content34% 
IMG OID638104403 
ProductABC-type multidrug transport system, ATP-binding protein 
Protein accessionYP_719058 
Protein GI113460991 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.652188 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGCTC TGGAAATTAA ACAATTGACA AAAGAATATA AAAATGGAGT TAAAGCACTA 
TCCGGAATTG ATCTTAGGGT AGAAGAGGGA GATTTTTATG CGTTGTTGGG ACATAACGGT
GCAGGAAAAT CAACAACCAT TGGCATCATC AGCTCTTTAA TAAATAAAAC CAGCGGAACA
ATAAAAGTGT TTGGTTATGA TTTGGATCGG CAATTAGCTC AATTAAAACG GCATATTGGC
TTAGTACCAC AAGAATTTAA CTTTAATCAA TTTGAAAAAA TTCAAGACAT TCTAGTGAAT
CAAGCCGGCT ATTATGGTAT TGAGCGAAAA GAAGCACTTA AGAGATCTGA AATATGGCTA
AAAAAATTAG ATTTATGGGA AAAGAAAGAT CAACAAGCTA TGCGTTTATC AGGTGGTATG
AAACGTCGCT TGATGATTGC TCGAGCATTA ATGCACAATC CTAAACTATT AATTTTAGAT
GAGCCTACCG CCGGTGTTGA TATTGAACTG CGACGTGCTA TGTGGACTTT TTTAAAAGAA
CTTAATCAAC AAGGAACAAC GATTATTTTA ACCACACATT ACTTAGAGGA AGCTGAAAAT
TTATGCCGTC ATATTGGCAT TATTCAGCAA GGTAAACTGA TTGTTGATAT GTCGATAAAA
GCCTTATTGT CACAGTTAGA AACAGAAACT TTTATTTTAG ATTTAGCACT TTCTAGTTCA
ATGCCAAAGA TTGATAATTA CAACGTCACA ATTATTGATG AGCTAACAAT GGAAGTTGAA
GTTAAGCGTG GACAAGGACT GAATAATTTA TTTATTCAAT TAAATGGTCA AGGAATTAAC
GTATTGAGTA TGCGGAATAA AGCCAATCGC TTAGAGGAGC TGTTCATTTC TATGGCGTTA
AATAAACCAA AAATCACGGA GAAAATATAA
 
Protein sequence
MLALEIKQLT KEYKNGVKAL SGIDLRVEEG DFYALLGHNG AGKSTTIGII SSLINKTSGT 
IKVFGYDLDR QLAQLKRHIG LVPQEFNFNQ FEKIQDILVN QAGYYGIERK EALKRSEIWL
KKLDLWEKKD QQAMRLSGGM KRRLMIARAL MHNPKLLILD EPTAGVDIEL RRAMWTFLKE
LNQQGTTIIL TTHYLEEAEN LCRHIGIIQQ GKLIVDMSIK ALLSQLETET FILDLALSSS
MPKIDNYNVT IIDELTMEVE VKRGQGLNNL FIQLNGQGIN VLSMRNKANR LEELFISMAL
NKPKITEKI