Gene HS_0844 details

Gene Information

• Locus tag: HS_0844
• Symbol: thrS
• ID: 4240336
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: +
• Start bp: 921208
• End bp: 923136
• Gene Length: 1929 bp
• Protein Length: 642 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 638104399
• Product: threonyl-tRNA synthetase
• Protein accession: YP_719054
• Protein GI: 113460987
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0441] Threonyl-tRNA synthetase
• TIGRFAM ID: [TIGR00418] threonyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAATTA TTACTTTACC TGACGGTTCA CAACGTCAAT TCGATAATCC CGTTTCTGTA 
TTGGAAGTTG CTCAATCAAT CGGTTCCGGA CTCGCTAAGG CTACTATTGC CGGTCGTGTG 
AACGGTGAGC GTCGAGATGC CTCAGATATG ATTAGTGAGG ATGCCAATCT TGAAATTATT 
ACCGCAAAAG ATGAAGACGG TTTAGAGATT ATCCGACACT CAACGGCACA TTTATTAGGG 
CATGCTATCA AGCAACTTTT CCCAAATGTG AAGATGGCTA TCGGTCCAAC TATTGACAAT 
GGTTTTTATT ACGACATTGA TTTGGACCGC TCTTTAACCC AAGAAGATAT TGATACCCTA 
GAAAAACGTA TGCTGGAGCT GGCAAAAACG AATTATGACG TAATAAAAAA ACGTGTCAGT 
TGGCAAGAAG CAAGAGATAC TTTTGAAAGT CGTGCTGAGC CTTACAAAAT AGCTATCTTA 
GATGAAAATA TTGCAAAAGA CGACCAACCT GCACTTTATC ATCACGAAGA ATATATTGAT 
ATGTGTCGTG GTCCGCACGT ACCCAATATG CGTTTCTGTC ACCATTTTAA ATTAATGAAA 
GTAGCTGGTG CATATTGGCG TGGAAATAGT GATAATAAAA TGCTCCAACG CATTTATGGT 
ACGGCTTGGG CAGATAAAAA ACAATTAGCC GATTATTTAC ATCGATTAGA AGAAGCTGCA 
AAACGTGATC ATCGTAAAAT CGGTAAGGCA TTGGATTTAT ACCATATGCA AGAGGAAGCA 
CCCGGTATGG TATTTTGGCA TAATGACGGT TGGACAATCT TCCGTGAGCT GGAAACATTT 
GTGCGTACAA AGTTAAAAGA ATACGATTAT CAAGAAGTAA AAGGTCCATT TATGATGGAT 
CGTGTGCTTT GGGAACGTAC AGGACACTGG CAAAATTATG CTGATTTAAT GTTTACTACA 
CAATCTGAAA ATAGAGAATA TGCCATTAAG CCAATGAATT GTCCTGGACA TGTTCAAATT 
TTCAATCAAG GCTTGAAATC TTATCGTGAT TTACCTATTC GTATGGCTGA ATTTGGTTCT 
TGCCATCGTA ATGAACCATC AGGATCTTTA CATGGATTAA TGCGTGTGCG TGGTTTTACA 
CAGGATGATG CACATATTTT CTGCACGGAA GATCAAATTG AATCGGAAGT AACGAGCTGT 
ATTAAAATGG TTTATGACAT TTATAGTACG TTTGGCTTTA CCGATATTTT TGTCAAACTT 
TCTACTCGTC CTGAAAAACG CATTGGTGAA GATGTCATGT GGGATCGTGC AGAGCAAGGC 
TTGGCAAATG CACTTAAACA CAATGGTCTT GAATATGAAA TTCAAGAGGG GGAAGGGGCA 
TTTTATGGGC CGAAAATTGA ATTTGCATTA AGAGATTGTT TAGATCGTGA ATGGCAATGC 
GGTACAATCC AATTAGATTT TGCGTTACCC GGACGTCTAG ATGCTACCTA TGTTGCAGAA 
GATAATGCCC GTCGCACACC TGTCATGATA CATCGTGCTA TCTTAGGTTC AATTGAACGT 
TTTATCGGTA TTATCACTGA AGAATATGCA GGTTTTTTCC CTACGTGGTT AGCACCGATT 
CAAGCTGTTG TGATGAATAT TACTGATAGT CAAGCGGATT ATGTGCAAAA AGTAGTTAAG 
CAATTTTCTG AAGCGGGATT ACGTGTAAAA GCGGATATAC GCAATGAAAA AGTCGGTTTC 
AAAATTCGTG AACATACCTT ACGTCGAGTA CCTTATATGC TAGTTTGCGG CGATAAAGAA 
ATTGTGGAAA ACAAGATTGC AGTTCGTACC CGTAAAGGGA CGGATTTAGG CACGTTTAGT 
GTTGAAGAAT TTGTTGAGAT TTTAAAACAA CAAGTGAGAA AACGTGAGTT AACCTTGTTA 
GGTGAATAA 

 

Protein sequence

MPIITLPDGS QRQFDNPVSV LEVAQSIGSG LAKATIAGRV NGERRDASDM ISEDANLEII 
TAKDEDGLEI IRHSTAHLLG HAIKQLFPNV KMAIGPTIDN GFYYDIDLDR SLTQEDIDTL 
EKRMLELAKT NYDVIKKRVS WQEARDTFES RAEPYKIAIL DENIAKDDQP ALYHHEEYID 
MCRGPHVPNM RFCHHFKLMK VAGAYWRGNS DNKMLQRIYG TAWADKKQLA DYLHRLEEAA 
KRDHRKIGKA LDLYHMQEEA PGMVFWHNDG WTIFRELETF VRTKLKEYDY QEVKGPFMMD 
RVLWERTGHW QNYADLMFTT QSENREYAIK PMNCPGHVQI FNQGLKSYRD LPIRMAEFGS 
CHRNEPSGSL HGLMRVRGFT QDDAHIFCTE DQIESEVTSC IKMVYDIYST FGFTDIFVKL 
STRPEKRIGE DVMWDRAEQG LANALKHNGL EYEIQEGEGA FYGPKIEFAL RDCLDREWQC 
GTIQLDFALP GRLDATYVAE DNARRTPVMI HRAILGSIER FIGIITEEYA GFFPTWLAPI 
QAVVMNITDS QADYVQKVVK QFSEAGLRVK ADIRNEKVGF KIREHTLRRV PYMLVCGDKE 
IVENKIAVRT RKGTDLGTFS VEEFVEILKQ QVRKRELTLL GE