Gene HS_0831 details

Gene Information

• Locus tag: HS_0831
• Symbol: nusB
• ID: 4240323
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: +
• Start bp: 909291
• End bp: 909725
• Gene Length: 435 bp
• Protein Length: 144 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 638104386
• Product: transcription antitermination protein NusB
• Protein accession: YP_719041
• Protein GI: 113460974
• COG category: [K] Transcription
• COG ID: [COG0781] Transcription termination factor
• TIGRFAM ID: [TIGR01951] transcription antitermination factor NusB

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0000197838
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGAAA AAGTAAAAAA ACTATCCCCA CGTCGTCGAG CAAGGGAATG TGCGGTACAG 
ACTTTGTATT CTTGGGCTAT TTCAAAAAAT GCACCTGAAG AAATAGAATT AAATTTCATT 
GTGGATCAAG ATAATGAAAT GAAGGGCGTG GATATGCCAT ATTTCAGAAA ATTGTTTCGT 
CAAACAGTTG ACCATGTTGA AATTGTTGAT AGCATAATGG CACCTTACTT AGATCGTGAT 
AATGTTGAGT TAGATCCTAT TGAATGTGCA ATTCTACGTT TAGCTGTTTA TGAATTGAAA 
TTTGAATTGG ATGTACCTTA TAAAGTGGTG ATCAATGAAG CTATTGAGGT TGCTAAAGTA 
TTTGGTGCAG AAGAAAGCCA TAAATATATT AATGGTGTTT TAGATAAAAT TGCACCTGCA 
CTTTCTCGTA AATAG 

 

Protein sequence

MTEKVKKLSP RRRARECAVQ TLYSWAISKN APEEIELNFI VDQDNEMKGV DMPYFRKLFR 
QTVDHVEIVD SIMAPYLDRD NVELDPIECA ILRLAVYELK FELDVPYKVV INEAIEVAKV 
FGAEESHKYI NGVLDKIAPA LSRK