Gene HS_0797 details

Gene Information

• Locus tag: HS_0797
• Symbol: uup-A
• ID: 4240288
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: +
• Start bp: 867381
• End bp: 869315
• Gene Length: 1935 bp
• Protein Length: 644 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 638104351
• Product: ABC transporter ATPase component
• Protein accession: YP_719007
• Protein GI: 113460940
• COG category: [R] General function prediction only
• COG ID: [COG0488] ATPase components of ABC transporters with duplicated ATPase domains

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.131165
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGTTTAA CCAATGGCTA TCTTTCTTTT GGTGATCAGC CGTTATTAGA TTGTGCAGAA 
TTACATATTG AGGCAGGTGA ACGAGTTTGT TTAGTCGGTC GTAACGGTGC AGGAAAATCA 
ACATTAATGA AAATATTGGC ACAAGACGTC ATGATGGATG ATGGATATTT GCAATTTGAA 
CGAGATTTGA TTGTGTCTCG GTTACCTCAA GATCCGCCAA ACTATGCAGA AGGCAATGTA 
TTTGATTATG TAGCGGAAGG TATTGGACAT TTAGCTGATT TATTAAAAGA TTATCATCGT 
ATTTCTCTAC GATTAGAAAA AGAATACAGT GAAACATTGC TTAATCAATT AGCACATATT 
CAAGCTGAAC TGGAACATAC CGGCGGTTGG CAATTTGAAA CAAAAATTAA AGAAATTCTA 
ACTAAATTAG ATTTGAATCC AGATACTTTA TTAAATGAGC TGTCAGGGGG GTGGCTACGC 
AAAGTTGCCC TTGCCAAAGC GTTAGTTTGT AATCCACATG TTTTATTACT TGATGAGCCG 
ACTAACCATT TAGATGTTGA CGCAATTGAA TGGCTCGAAG AATTTTTATT GACCTTTAGC 
GGCAGTATTA TTTTTATTTC TCATGACCGC TCTTTTATTC GAAAAATGGC GACACGTATT 
GTGGATTTAG ATCGAGGTAA ATTAGTTTCT TATCCGGGCA ATTATGATGT GTATTTAACA 
GCCAAAGAGG AAAATTTACG GGTTGAAGCA CTAAAAAATG AACTCTTTGA CAAAAAATTA 
GCACAAGAAG AAGTTTGGAT TAGACAAGGA ATTAAAGCTC GCCGAACTAG AAATGAAGGT 
CGTGTAAGAG CGTTAAAAGC ATTGCGTGAA GAACGTCGGC AACGGAGAGA GGTACTGGGT 
AAAGCTAAAC TACAATTAGA TAATTCAAGT CGCTCAGGAA AGATGGTATT TGAATTAGAA 
AATGTTTGTT ATGAGATAGC TGGGAAAACC TTGTTAAAAG ATTTCACAAC GACTATTTTG 
CGTGGAGATA AAATTGCTTT AGTCGGTGCA AACGGGTGCG GTAAAACAAC GTTTATCAAA 
TTGTTGTTGG GAGAAATTAA ACCAACGTCT GGAACGGTTA GGTGCGGTAC AAAATTAGAA 
ATTGCTTATT TTGATCAGTA TCGTGCTGAT CTCGATCCGG AAAAATCGGT TATGGATAAT 
GTAGCTGATG GCAAACAAGA TATTGAAGTG AATGGTATTA AACGCCATGT TTTAGGTTAT 
TTGCAAGATT TCTTATTTCC TCCTAAACGT GCTATGACAC CCGTAAAAGC ACTTTCCGGC 
GGAGAGCGTA ATCGCCTGTT GTTAGCAAAA TTATTACTCA AACCCAATAA TTTATTAATT 
CTTGATGAAC CGACAAATGA TTTAGACGTG GAAACATTGG AATTGTTGGA AGAATTATTG 
GCGGATTATC AAGGAACACT TTTAATTGTC AGTCATGATC GTCAATTTAT TGATAATACA 
GCAACTGAAT GTTATATGTT TGAGGGAAAT GGCGTTCTGA ATAAATATGT GGGCGGTTTT 
TTTGATGCAA AACAACAGCA AGCTAATTAT TTTGCTTGTA AAGCAGAGGA ACAAGTTAAG 
CAGAAAAAAC ATGAAGAAGA GAAAAGAGGC GTAAATTCAG TCGTTGAGAA AGCAGAATAC 
AAACCTCGCC AAGTTAAATT ATCCTATAAA GAGCGGCTTG AACTGGAACA ATTACCTCAG 
TTGTTGGAAG AATTAGAAGA AAAAATTACC GCACTTCAAA CGGAAATTAG TGATGTAGAT 
TTCTTTCAGC AACCGCATGA ATATACATCA ACAAAATTAC AAACTTTAGC AGATATGGAG 
CAAGATTTAG AGATGGCTTT TTTACGTTGG GAAGAATTGG AAGAAAAAAA GAATTTAGCT 
AAGATTAACG CTTAA 

 

Protein sequence

MSLTNGYLSF GDQPLLDCAE LHIEAGERVC LVGRNGAGKS TLMKILAQDV MMDDGYLQFE 
RDLIVSRLPQ DPPNYAEGNV FDYVAEGIGH LADLLKDYHR ISLRLEKEYS ETLLNQLAHI 
QAELEHTGGW QFETKIKEIL TKLDLNPDTL LNELSGGWLR KVALAKALVC NPHVLLLDEP 
TNHLDVDAIE WLEEFLLTFS GSIIFISHDR SFIRKMATRI VDLDRGKLVS YPGNYDVYLT 
AKEENLRVEA LKNELFDKKL AQEEVWIRQG IKARRTRNEG RVRALKALRE ERRQRREVLG 
KAKLQLDNSS RSGKMVFELE NVCYEIAGKT LLKDFTTTIL RGDKIALVGA NGCGKTTFIK 
LLLGEIKPTS GTVRCGTKLE IAYFDQYRAD LDPEKSVMDN VADGKQDIEV NGIKRHVLGY 
LQDFLFPPKR AMTPVKALSG GERNRLLLAK LLLKPNNLLI LDEPTNDLDV ETLELLEELL 
ADYQGTLLIV SHDRQFIDNT ATECYMFEGN GVLNKYVGGF FDAKQQQANY FACKAEEQVK 
QKKHEEEKRG VNSVVEKAEY KPRQVKLSYK ERLELEQLPQ LLEELEEKIT ALQTEISDVD 
FFQQPHEYTS TKLQTLADME QDLEMAFLRW EELEEKKNLA KINA