Gene HS_0792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0792 
Symbol 
ID4240283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp861320 
End bp862510 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content25% 
IMG OID638104346 
Productaminotransferase 
Protein accessionYP_719002 
Protein GI113460935 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1168] Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.108928 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAGT TATCTGTGGA TTGTATTATT GAGCGGAGAG ATTGTCATAG TGCTAAATGG 
GAATTAGCAA AAAAATATAG TGAAGATATT ATTCCTATGT CGGTAGCTGA TATGGATATT
CCTTCACCTA GAGAGTTAAT AGAGTATTTA GGAAAGTTAA ATAAAAAAGG GATATATGGA
TATACTATTT TTCCTAATAA TTATAAAAAA ATAATTCAAA AATATTTTTT AAGACATTAT
GGAATTTATA TAGATGAAGA AAGTATAGTA TTTTGTCCAA GAATAATACA AGCTGTTTCT
ATTTATATCA GAGAGTTTAC ATGTATAAAT GATAATATAT CTATTTTATC ACCTTCTTAT
AAACCATTGG TAAATGCAAT TTCTTTAAAT AAAAGAAATG CAATTTTATG TGATTTAATA
TATAAAAATA ATCAATACTA TATTAATTTT GATTTGTTAG AAGATTGCTT TAAGAAATCA
AAAGTATTTA TATTTATTTC TCCACATAAT CCTACAGGAA CAGTATGGAG TAAAAATGAT
TTGGAAAAAA TAGCCATGTT AGCAGAAAAA TATGGTGTCT TTATTATATC TGATGATATA
CATGCAGATT TTAATTTTTC CAACAATAAG CATATTTTTA TTTCATCTGT TAGTGAATAT
GTTGAGAATA ATTCTATTAT ATGTACATCC CCATCTAAAA CTTTTAATAT TCCTGGATTA
GAAATATCAA ACTTATTAAT AAAAAATACT TGCATTAGAA ATAAATTTAA ACATCACTTA
GAAGCATTGG GATTTCATAA TCCAAATTAT TTTTCTGCAT CTGCATTAAT AATTACATAT
AGTAATTGTG ATGAGTGGAG AAAAGAATTA TTGGAATATA TTAGAGAGAA TAGATCTTTG
GTGAAAGATT TTTTTGAAAA AGAGATTCCT GAGTTAGAGG TTGTTAATAG TCAAGGGACA
TATCTTGTTT GGATTAACTA TAAAAAATTA AACCTAAATG AAGATAAATT AAAATATTGG
CTCATTAACT TATCTAAAAT TGAAATGTCT TGGGGTTCTG ATTTCTTAAG AGGTGGTGAA
TATTTTTTTA GAATGAATAT AGCTATGCCA AGAATAGTCT TAATATCTTG TTTAAGAAAA
ATAAAAGAAG GATTAATTTT GCTATTAGAG GAATCAAATT ATGGAAAATA A
 
Protein sequence
MKELSVDCII ERRDCHSAKW ELAKKYSEDI IPMSVADMDI PSPRELIEYL GKLNKKGIYG 
YTIFPNNYKK IIQKYFLRHY GIYIDEESIV FCPRIIQAVS IYIREFTCIN DNISILSPSY
KPLVNAISLN KRNAILCDLI YKNNQYYINF DLLEDCFKKS KVFIFISPHN PTGTVWSKND
LEKIAMLAEK YGVFIISDDI HADFNFSNNK HIFISSVSEY VENNSIICTS PSKTFNIPGL
EISNLLIKNT CIRNKFKHHL EALGFHNPNY FSASALIITY SNCDEWRKEL LEYIRENRSL
VKDFFEKEIP ELEVVNSQGT YLVWINYKKL NLNEDKLKYW LINLSKIEMS WGSDFLRGGE
YFFRMNIAMP RIVLISCLRK IKEGLILLLE ESNYGK