Gene HS_0788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0788 
Symbol 
ID4240279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp843815 
End bp845362 
Gene Length1548 bp 
Protein Length515 aa 
Translation table11 
GC content39% 
IMG OID638104342 
ProductNa(+)/H(+) antiporter 
Protein accessionYP_718998 
Protein GI113460931 
COG category[C] Energy production and conversion 
COG ID[COG1757] Na+/H+ antiporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTTG TAAATTATTC CACATCTATT TATTCGGTTA TTCCACCGAT ATTAGCTTTG 
CTATTAGCCA TTGTAACTCG GAAAGTCATT TTATCTTTAA GCATTGGTAT TATTACCGGT
GCTTTAATGT TGACCAAAGA TACATCCATA TTGGATAGTA TGCCTTATTT GTGGAATCAT
ATCTCCGCTT TGGTTTATAG TATTGAAGAA AACGGCTCAA TCGCATTTGC GTGGGACACA
ATAAATATTA TCCTCTTTTT AGTTTTACTT GGTATTTTGA CCGCACTTTT AACTGTATCC
GGTAGTAACC AAGCCTTTGC TGAATGGGCT CAGAAACGTA TTAAAGGTCG TCGTGGTGCA
AAATTAATGG CGGCTGCTTT GGTATTCGTT ACATTTATTG ATGATTATTT CCATAGTTTA
GCGGTTGGTG CAATTGCCCG TCCGGTTACG GATAAATTCA ATGTATCTCG AGCAAAATTA
GCTTATATTC TTGATTCAAC AGCAGCCCCC ATGTGCGTTA TGATGCCTGT ATCCAGTTGG
GGGGCTTATA TCATTACCTT GATTTCGGGA CTATTAGCAA CTTATGCCAT TACCGATTAC
TCTCCAATCG GTGCATTTAT GGCGATGAGT TCAATGAATT TCTATGCAAT TTTCTCTATT
TTATTGGTAT TTTTCGTGGC TTATTTTTCA TTTGATATTG GGTCAATGGC GAGACATGAA
AGATTGGCAT TAGAGAGAGG GGATACAGAA AGAGAAGTTG AAATACAAAC AAAGATAAAA
GGGCATGTAC GAAATCTTGT TTTGCCAATA GTGGTATTGA TTGTAGCAAC TGTGGCAATG
ATGATGTATA CCGGCGGACA AGCATTAATT GCTGACGGTA AAGCATTTAG CGTGCTGGGT
GCATTTGAAA ACACAACGGT AGGGATTTCT CTCGTTGTTG GAGGGATTGC CTCAGTAGTG
ATGGTTACTC TCTGTATTTT AACTGATGGT CAGATTAGTT TAAATGAATA TATTAAATCT
TGGGGATTGG GTGCAAAATC GATGTCCGGT GCCATTTTAA TTCTGTGCTT TGCATGGACG
ATTAATTCGG TTGTGAAAGA TATGCAAACA GGGACATATT TATCCAGCCT TGTATCTGGC
AATCTTCCTA TTGCAACGTT ACCGGCATTA CTTTTCATCC TCGGTGCAGT GATGGCATTT
TCCACAGGAA CCAGCTGGGG AACATTTGGA ATAATGCTAC CAATTGCCGC AGAAATTGCA
TCAAATGCCG CCCCTGAATT AATGTTACCT TGCTTATCTG CGGTAATGGC TGGTGCAGTT
TGTGGAGATC ATTGTTCCCC TGTATCTGAT ACAACAATTT TGTCCTCTAC CGGAGCGAAA
TGTAACCACA TGGATCACGT AACAACACAA TTACCTTATG CGTTAACATT AGCAGTCGCA
ACCATTGTAG GTTACTTAGT TGTTGGCTTC ACATTATCTG GCTTATTGGG TTTTATTGCT
TGTGCTGTTA CTTTAGCTGC TTTAATGTTA ATTTTAAGAA AACGCTAA
 
Protein sequence
MELVNYSTSI YSVIPPILAL LLAIVTRKVI LSLSIGIITG ALMLTKDTSI LDSMPYLWNH 
ISALVYSIEE NGSIAFAWDT INIILFLVLL GILTALLTVS GSNQAFAEWA QKRIKGRRGA
KLMAAALVFV TFIDDYFHSL AVGAIARPVT DKFNVSRAKL AYILDSTAAP MCVMMPVSSW
GAYIITLISG LLATYAITDY SPIGAFMAMS SMNFYAIFSI LLVFFVAYFS FDIGSMARHE
RLALERGDTE REVEIQTKIK GHVRNLVLPI VVLIVATVAM MMYTGGQALI ADGKAFSVLG
AFENTTVGIS LVVGGIASVV MVTLCILTDG QISLNEYIKS WGLGAKSMSG AILILCFAWT
INSVVKDMQT GTYLSSLVSG NLPIATLPAL LFILGAVMAF STGTSWGTFG IMLPIAAEIA
SNAAPELMLP CLSAVMAGAV CGDHCSPVSD TTILSSTGAK CNHMDHVTTQ LPYALTLAVA
TIVGYLVVGF TLSGLLGFIA CAVTLAALML ILRKR