Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0763 |
Symbol | rbsA |
ID | 4240254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 817351 |
End bp | 818868 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638104317 |
Product | ribose ABC transporter, ATP-binding protein |
Protein accession | YP_718973 |
Protein GI | 113460906 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.831413 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGGCAA ATGGAGACGT TCCAATTCTT CAGCTACAGC ATATCATCAA ACGATTCGGT AATCAGGTAG CGGTAAATGA TGTTAGCCTT AATATTCACC GGGGAGAAAT TGTTGCATTG CTCGGTGAGA ATGGTGCGGG CAAATCCACT TTAATTAAAA TTCTGGCAGG TCTCTATTCT CGTGATGAAG GTGAAATTTA TTTTCATCAA CAAAAAATCC AATCGGCACA ATCTCTTACC AATAAAAATA AACAACCTAT TGCTTTTATT CATCAAGATT TAGGGCTGGT TGAATGGATG ACGATTGCTG AAAATATGGC ATTTGTAATG GGATTTCCTC GCCGTTTCGG CTTGATTGAT TGGAAAAAAA TTAATCAACA AGCACAAGAA GCATTGGATT TTGTTGGTAT TCACCTTTCT GCTCAAACTC GAGTTTTTGA CTTAAGTCGT ACAGAAAAAG CGTTATTGAC CATTGCTCGT GCGATTGCTG TCAATGCTGA GATTTTAGTG TTGGATGAAC CAACTGCCTC TCTACCTGCA AGTGATGTTG AACATTTATT CAAGGTGCTT AATCGCCTAC GTAAACAGGG CGTTGGTATG ATTTATGTCA CTCACCGATT GGATGAGGTC ATTAGGCTTT CTGATCGCAT TTTAGTCATG CGTGATGGTT ATTCTGTGGC AGAAGGTTCG ACTAAAGATT ATGATGTGAA AGCTCTAGTG AAGGCTATTG TTGGTGAAGA AACAAGAGAA AAACAACGTG AACCATTGCC TAAAAACACA CCAGAAGTGG TACGGCTTAA CGAAGTTGTT GTTGGTGATA CAGGTCCTGT TTCCTTTAGT TTACATCAGG GCGAAATGAT TGCATTAGCA GGATTGCGAG GTGCGGGGCA AGAAGAGATA GGACGATTAT TATTTGGGCT ACGTAAGTTG GAAAGTGGAG ACATTAGTTT AAATGAATGT GCTTATCATG CCGAGTCGCC ATGTGAGGCA ATTTATAAAG GTGTAGCACT TGTTGCCGGA GACCGTATCC GAGAAGGTCT TGTCATGTCA ATGACAACCA TGGAAAATCT CTTTATCAAT CCTATCTTAA GCGGTCATTT TCCATTAAAA AATTATGCAA GCAAAAAAGA AAGGTCTGAA TGTTGGTATC AATTCCAGCT CTTTGATATT CGGCCGAAAA ATTTATTTAT TGAAGTCAGT TCGCTTTCAG GAGGTAATCA ACAGAAAATT GTGCTTGCAC GTTGGATGCA GCTCAATACA CCTGTGCTGA TTTTAGAAGA TCCAACTGCG GGTGTAGACG TTGGTGCACG AGCAGAAATT TATGACTTAT TAAATCAAGC CTTGAAAAAA GGTGTTGCAA TTATTGTGAT TTCAAACGAT TTTGAAGAAA TTGCACATCT TTGTAATCGA GCCTTGGTAT TCAACCGAGG CGATATCGTG GGTGAATTAT TCAATGAACA AGTCACATTT GCGAATTTGC TGGCACTCGC TTCGGACGCA TCTGCTACCA TAAATTAA
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Protein sequence | MLANGDVPIL QLQHIIKRFG NQVAVNDVSL NIHRGEIVAL LGENGAGKST LIKILAGLYS RDEGEIYFHQ QKIQSAQSLT NKNKQPIAFI HQDLGLVEWM TIAENMAFVM GFPRRFGLID WKKINQQAQE ALDFVGIHLS AQTRVFDLSR TEKALLTIAR AIAVNAEILV LDEPTASLPA SDVEHLFKVL NRLRKQGVGM IYVTHRLDEV IRLSDRILVM RDGYSVAEGS TKDYDVKALV KAIVGEETRE KQREPLPKNT PEVVRLNEVV VGDTGPVSFS LHQGEMIALA GLRGAGQEEI GRLLFGLRKL ESGDISLNEC AYHAESPCEA IYKGVALVAG DRIREGLVMS MTTMENLFIN PILSGHFPLK NYASKKERSE CWYQFQLFDI RPKNLFIEVS SLSGGNQQKI VLARWMQLNT PVLILEDPTA GVDVGARAEI YDLLNQALKK GVAIIVISND FEEIAHLCNR ALVFNRGDIV GELFNEQVTF ANLLALASDA SATIN
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