Gene HS_0736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0736 
Symbolrnd 
ID4240227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp791850 
End bp792995 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content37% 
IMG OID638104290 
Productribonuclease D 
Protein accessionYP_718946 
Protein GI113460879 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0349] Ribonuclease D 
TIGRFAM ID[TIGR01388] ribonuclease D 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0989413 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGTTT TAATAAAAGA AATCCAAAAT TCACCGCAGT TTCAATTGAT TACTACAAAT 
GATCGTTTAT ATGAGATTTG CCAACAGGCA CAACAAAAAA CGGTGATTGC TTTGGATACT
GAGTTTGTTC GCACCAAAAG TTTTTATCCC AAACTAGGAT TGATTCAACT TTATGACGGT
GAGCAAGTGA GCTTAATAGA TCCTTTTGAG TTGAGTGATT TTTCTCCTTT TATTCAACTT
TTAGCCAATC AAAAGGTCAC AAAAGTATTG CACGCTTGCA GTGAGGATCT GGAAGTTTTT
CAACATTATT TTCAGCAGTT GCCAACGCCA ATGTTAGATA CTCAAATTAT GGCGGCATTT
TTGCAACATG GCAATTCCAT TGGTTTAGCT ATATTGCTAA AACATTATTT CAAGCTGGAA
ATAGATAAAG GGATTTCTCG CACTAATTGG CTTGCTCGCC CTTTGTCTGA CGTACAATTG
CACTATGCTG CTGCCGATGT ATGGTATTTA TTGCCATTAT ATCAACGTAT GCAACAAAAA
TTAGCTCAAA CCTCTTGGCA AAGTGCGGTG CAAAATGATT GTGAAAATTT GTTGAACAAA
TATACTCAGA TAAAAGATAG TGACAATGCT TATTTTTCTA TATCCGGAGC GTGGAAATTA
AACTCTCAGG AATTAATGCG TTTAAAGCTG TTAGCAAAAT GGAGACAAGA AGAAGCGATA
AAGCGTAATC TTGCATTAAA TTTTGTTGTT CGTGCAGAGC ATTTGATTTT ATTAGCACAA
CATAATCCAA AATATACTTC ACAGCTGTTA TCCATTGGTT TATCTCCGCT GGAAGTGCGT
ATTCATGGTA AAAAAATATT ACAACTCTTA GAGAAAGCAA ACAAAGCACC GGCGTATGAC
TATCCACCAC CAATTTTGCG AGTCACTGAT GATCATCGTT ATCGTGTAGC AATTAAATTG
TTACAAGCAA CGTTACGGGA AATCACTCCG GCAGATTTAC CGACTGAAGT TTTGTCAACT
AAGCGTATGT TAGATCAGCT GATAAAGTGG CATTGGATTA AACAAGACAA TCCTCATGAT
TTACCTGATT TGCTTTGCGG ATGGCGTAGG GAGTTTGGAT TATTGTTATT AAAGGCTTTG
CATTAA
 
Protein sequence
MSVLIKEIQN SPQFQLITTN DRLYEICQQA QQKTVIALDT EFVRTKSFYP KLGLIQLYDG 
EQVSLIDPFE LSDFSPFIQL LANQKVTKVL HACSEDLEVF QHYFQQLPTP MLDTQIMAAF
LQHGNSIGLA ILLKHYFKLE IDKGISRTNW LARPLSDVQL HYAAADVWYL LPLYQRMQQK
LAQTSWQSAV QNDCENLLNK YTQIKDSDNA YFSISGAWKL NSQELMRLKL LAKWRQEEAI
KRNLALNFVV RAEHLILLAQ HNPKYTSQLL SIGLSPLEVR IHGKKILQLL EKANKAPAYD
YPPPILRVTD DHRYRVAIKL LQATLREITP ADLPTEVLST KRMLDQLIKW HWIKQDNPHD
LPDLLCGWRR EFGLLLLKAL H