Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0704 |
Symbol | deaD |
ID | 4240192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 749193 |
End bp | 750998 |
Gene Length | 1806 bp |
Protein Length | 601 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638104256 |
Product | ATP-dependent RNA helicase |
Protein accession | YP_718916 |
Protein GI | 113460849 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGAAA CAACAATTAC TTTTAATGAT TTAGGGTTAC CTGAATTCAT CCTTAATGCA GTGTCCGAAA TGGGCTTTTC AACTCCTTCC CCAATTCAAC AGGCTTGTAT CCCGCATCTA TTAAATGGGC ATGATGTGCT TGGCATGGCA CAAACCGGTA GTGGAAAAAC AGCGGCATTT TCTTTGCCAT TATTGGCGAA AATTGATACT AATGAAAAAT ATCCACAAAT GTTAGTAATG GCACCAACCC GTGAGTTGGC TATTCAAGTT GCTGATGCTT GTGAACAGTT TGTGAAGTTT TCTAAGGGGG TGCGTATTGT TACTCTGTAC GGCGGACAAC GTTACGATAT TCAATTAAGA GCTTTAAAAC AAGGTGCTCA AGTGGTCGTC GGAACACCGG GGCGTATTTT AGATCATATT CGTCGTGGTA CATTGGATCT GTCAAATTTA CAGTCTATTG TATTAGATGA AGCGGATGAA ATGCTACGCA TGGGATTTAT TGATGATGTT GAAACCGTCA TGGCGGAACT TCCGGAGCAA CACCAGACCG CACTTTTCTC TGCAACGATG CCTGCTCCAA TTAAACGAAT TACAAAACGC TTTATGCACA ATCCGCAAGA AGTAAAAATT CAGTCAACAC AACGTACTGC ACCGGATATT ACGCAAAGTT GTTGGTATGT TCGCGGTTTT CGTAAAAATG AAGCATTGTT GCGTTTCTTA GAAGTGGAAG ATTTTGATGC TGCAATTATT TTTACTCGAA CTAAAACAGC TACATTAGAT GTCACTGAAT TATTGGAAAA ACACGGGTTT CGTGCAGCTG CATTAAATGG AGACATGACA CAGCAATTAC GTGAGCAAAC ATTAGATCGT CTTCGCAATG GAAGTCTTGA TATTTTAGTG GCGACTGATG TTGCGGCTCG TGGTTTAGAT GTTGAACGTA TTAGTTTAGT TGTTAATTAT GATATTCCGT TGGATGCGGA AAGTTATGTT CACCGTATTG GGCGTACAGG CCGAGCAGGT CGTGCGGGCC GTGCGATTTT GTTTGTTGAG CCTAAAGAGC GTCGTTTATT GGGGAATATT GAACGCTTAA TGAAAAAAGC AATTGAAGAA GTGGAAATGC CTAATCATCT TGCTTTACAA GAATGTCGCC GTAAAAACTT CGTAGCTAAA ATCACTAAGC AATTAGAACA TCATGATCTA GAACAATATC GTAGCTTATT GGAAGATTTA TTTACGGCAG ATCAGGATCA GGAAGACATT GCCGCAGCTA TGTTGATGTT ATTACAAGGC AAACAAAAAC TTATTCTTCC TGAAGATCCA GTGTTTGAAA AACATTCACG ACGTAATGAT CGTAGAGAGA GAGGGGAGCG TCGAGGTAAA GAAAATCCAC GTTCTGAGCG TCATGGGTAT GGTACTCCGC AACCAATGGA TTTATATCGT ATTGAAGTCG GTAGATGTGA TGGTGTCGAG GTTCGTCATG TTGTAGGTGC AATTGCAAAT GAAGGGGATA TTCAAAGTCG TTATATTGGA CATATTAAAC TTTATGACAC TTATTCAACG ATTGAATTGC CACAGGGCAT GCCAAAAGAA TTGTTACAAG TATTTGCTAA AACGCGTGTA TTAAATAAAC AGATGCGTAT GTCTTTCGTA AGTGCGGTCA ATTCTGAGGA AGAGTTTGAA GCCGGCTCAG GTGGTAAACG AAAAGGGCGT TATGAACGTG AGTTTCGTGG TGGACGTAAA TTTAATGAAA AAAGTAACCG CTCTTTTTCT GAACAGCGTA AAGAACGCAG AGAAAGAAAG AGATAA
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Protein sequence | MTETTITFND LGLPEFILNA VSEMGFSTPS PIQQACIPHL LNGHDVLGMA QTGSGKTAAF SLPLLAKIDT NEKYPQMLVM APTRELAIQV ADACEQFVKF SKGVRIVTLY GGQRYDIQLR ALKQGAQVVV GTPGRILDHI RRGTLDLSNL QSIVLDEADE MLRMGFIDDV ETVMAELPEQ HQTALFSATM PAPIKRITKR FMHNPQEVKI QSTQRTAPDI TQSCWYVRGF RKNEALLRFL EVEDFDAAII FTRTKTATLD VTELLEKHGF RAAALNGDMT QQLREQTLDR LRNGSLDILV ATDVAARGLD VERISLVVNY DIPLDAESYV HRIGRTGRAG RAGRAILFVE PKERRLLGNI ERLMKKAIEE VEMPNHLALQ ECRRKNFVAK ITKQLEHHDL EQYRSLLEDL FTADQDQEDI AAAMLMLLQG KQKLILPEDP VFEKHSRRND RRERGERRGK ENPRSERHGY GTPQPMDLYR IEVGRCDGVE VRHVVGAIAN EGDIQSRYIG HIKLYDTYST IELPQGMPKE LLQVFAKTRV LNKQMRMSFV SAVNSEEEFE AGSGGKRKGR YEREFRGGRK FNEKSNRSFS EQRKERRERK R
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