Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0673 |
Symbol | srlR |
ID | 4240161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | - |
Start bp | 720224 |
End bp | 721033 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 638104225 |
Product | DNA-bindng transcriptional repressor SrlR |
Protein accession | YP_718885 |
Protein GI | 113460818 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCTT TTGAAAGAAG ACAGCTAATT TTAGCGTTTT TAGCAAAATA TGGGCGAACG GAAGTAGATG TTTTGGCTAC TCATTTTAAA TTGACGGGTG CAACAATTCG TAAGGATTTA ACCGCACTTG AAGAAGATAG AAAAGTCTTA CGTACTTATG GAAGTGTCGT CTTAATTGAT GAAGAACTTC TTGAACGAGA AGAAAAAATC AATAAAGAGG ACAAAGAAGA TAAACCGATT GCACAAAAAA CAGCAATTAA TATTCAACAA AAGCAACGTA TTGGGCAAAA AGCAGCAACG CTTATTAGTG AAGGAAATTC GGTCATTTTT GATGCAGGGA GTACTGTACT ACAAATGATC CCATACTTAA AGCAGTTTGA TAATCTTTCT TTAATGACAA ATAGTTTAAC AATCTTTAAT GCTATTTTAG TACTGAATAA ACCTTATAAT TTATTAATTT CCGGCGGGAC ATTTCGTGAA AAATCGGCCT CTTTTCACGG TTATTTTGCT GAATCTGCTT TTATCGGTTC AACCTTTGAT ATACTTTTTA TCGGTACTGA TGGCTTTGAT TTAGACGTTG GGCTAACTAC TTTTAATGAG GTCTATAAAG TGAGTTCTCT AATGTGTGAT GCAGCGAAAA AAATTGTGGT TTTAGCCGAT TCCAGCAAAT TTGGAAGAAA AAGCCCGAAT ATTGTGTGTG GTTTAGATAA AATCCATACA ATTATTACGG ATGAAGGTTT GTCTTTAGAA ATGAGAGAAA AAATTAGAGA AAAAGGTATT GAACTATTAG TAGTGCCAAA AGACAACTAA
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Protein sequence | MKPFERRQLI LAFLAKYGRT EVDVLATHFK LTGATIRKDL TALEEDRKVL RTYGSVVLID EELLEREEKI NKEDKEDKPI AQKTAINIQQ KQRIGQKAAT LISEGNSVIF DAGSTVLQMI PYLKQFDNLS LMTNSLTIFN AILVLNKPYN LLISGGTFRE KSASFHGYFA ESAFIGSTFD ILFIGTDGFD LDVGLTTFNE VYKVSSLMCD AAKKIVVLAD SSKFGRKSPN IVCGLDKIHT IITDEGLSLE MREKIREKGI ELLVVPKDN
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