Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0647 |
Symbol | |
ID | 4240135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 694283 |
End bp | 695284 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 638104199 |
Product | sodium-dependent transporter |
Protein accession | YP_718859 |
Protein GI | 113460792 |
COG category | [R] General function prediction only |
COG ID | [COG0385] Predicted Na+-dependent transporter |
TIGRFAM ID | [TIGR00841] bile acid transporter |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00310924 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTTTAT TAAAAAAGTT CAGTCATCTT TTAGCAAAAT ACACCGCACT TGTTATCATT GCATTAGCTT GTGTTACTTT TTATTCCCCA AATCTTTTTA CTTGGGTAAA AGGTGATGCA CAAATTATTG TACTTGGTCT AATAATGCTA TCAATGGGCA TGACCTTAGG TAAAGAAGAC TACCGTATTC TTGCAAAACG TCCTTTTGAT ATTTTAGTAG GAACTATCGC CCAGTATAGT ATTATGCCTT TTGTTGCAAT TTCTATTGCA CAACTCTTTA ATTTATCTCT AGGGTTAACT TTGGGTTTAG TGTTGGTTGG TTGTTGTCCC GGTGGTGTTG CTTCAAATAT CATGAGCTTT CTTTGTAAAG GCGATGTGGC TTACTCTGTG GGTATGACTA CTGTTTCTAC TATTTTAGCT CCAATAATGA CCCCACTTTT ATTAAATTAT TTAGTAGGTG AAACGGTTGC AATGGACGGT TGGGCAATGT TTAAGTTTAT GTTGTTAGTA ACATTGGTTC CTGTTGGTAT TGGCTCAATT ATGAACATAA CGTTTGAAAA TAAAAAATGG TTTCAAGAGT TGCGTGAATT AATGCCGGGT GTTGCGGTTA TTAACTTTGC TTTTATTGTT GGTGGCGTTG TTGCGGTACA TGGAAATAAA TTTTTAGAAT CCGGTTTTAT AATTTTTGTA TGTATTGTTT TCCATAATGT TATTGGATAC ATCTTAGGTT TCTTTACAGG GCGTTTATTT GGAATGAGTA CAGCTAAAAA ACGCACTTTA TCTATTGAAG TAGGAGTACA AAATGCTGGT TTGGCAACAG GATTAAGTTC AAAATTTTTC CCAACTAATG CGGAGTCTGC TATTGCTTGT GCAGTATCTT GCGTATGGCA TTCTATTTCA GGCACAATTT TAGCAAATTT ATTTTTATGG TGGGATAAAC GCAAAAATAC ATCAACTCAA GAGAACAATC CTGCTAAAAA TTTAATGAAT AGCACGAAAT AA
|
Protein sequence | MFLLKKFSHL LAKYTALVII ALACVTFYSP NLFTWVKGDA QIIVLGLIML SMGMTLGKED YRILAKRPFD ILVGTIAQYS IMPFVAISIA QLFNLSLGLT LGLVLVGCCP GGVASNIMSF LCKGDVAYSV GMTTVSTILA PIMTPLLLNY LVGETVAMDG WAMFKFMLLV TLVPVGIGSI MNITFENKKW FQELRELMPG VAVINFAFIV GGVVAVHGNK FLESGFIIFV CIVFHNVIGY ILGFFTGRLF GMSTAKKRTL SIEVGVQNAG LATGLSSKFF PTNAESAIAC AVSCVWHSIS GTILANLFLW WDKRKNTSTQ ENNPAKNLMN STK
|
| |