Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0614 |
Symbol | |
ID | 4240100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 657001 |
End bp | 658215 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638104166 |
Product | membrane fusion protein |
Protein accession | YP_718826 |
Protein GI | 113460759 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTATTC AAACTCACAT AAAAGCAAAA CGTTCTCATG TGTTTTTCTT AAAACTGTTT TTGGGCATCA TTGTGCTTTT ATTTGCCGTT ATGATCGGTT TAAAAGTTGC TTCAAAAATG CTTATTGGCA AGATGATAGC CGGTATGCCC GAAAAAACGA CACCGGTTAC GGCAATTACA GTTGTACCAA CTACCTGGAC ACCTGTTATC GAAACAACAG GCTTGGTGAG ACCTAATCAA GGTGCGGTTT TGAGTGCACA AGCACCAGGG ACTGTTGCAA ATATATTTAT CCAATCAGGA CAACCTGTTA AAAAGGGAGA TGTGTTGGTT GAGTTGGATA TTTCTGTTGA ACAAGCTAAT TTACAGGCAT CAGAAGCAAA ATTAACCACA GCAAAACAAA TCTATAAACG CTATCTGAAT TTGTATAAAA CGAAGAGTGT TTCTCAGCAA GAATTGGATA ATGCAAAAGC TAATTATGAG TCGTTGGTAG CAAATATTAA CGCCTTAAAA GCGGCAATTG AGCGTCGCAA AATTGTTGCA CCTTTTGACG GTATTACAGG TATTGTTAAA GTGAATGTTG GGCAATATGT TAATGTGGGA ACGCCTATTG TACGTGTTGA AGATACAAGT TCCATGAAAG TTGATTTTTC TATTGCACAA AATGAGTTGG AAAAGTTGTT TATTGGACAA ACAGTGACGG CAACAAGTGA TGCACGTTTA GGTGAAACGT TTGGTGCAAA AATTACCGCA CTTGAACCAG CAGTGAATGC AGCAACCGGT TTAATTGATG TGCAAGCAAC TTTCGAAGAT GAAGACAGTC GTAAGTTACT ATCCGGTATG TTTATGAGAT TGCGTGTTGC ATTGACGACC GAAAAAGATC AAATCGTTAT TCCGCAAGTA GGTATTAGCT ACCATATGTA TGGTGAAAGT GCTTATGTTT TGACCGCACT TTCTGAGGAA GACAAGAAAA CATTACTTGA TAACGAAAAA TTTGCTTATA AAGACAGTAT AGACAGGGTT TATCGAGTAA AACAAACTAC TGTATTTACT AAAGATCGTC AGGGTATTTA TGCACAATTA AAAGGGCAAG ATATTAAGCC GGGTGACCAA ATTGTGGTTG GCGGTCAGCA AGCTATTACC AATGGTAGTT TAGTGGTGGT TGTTGATAAA GAAACAATAG GCACACAACA ACCTGCCAAG AAAACTAATC TTTAA
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Protein sequence | MSIQTHIKAK RSHVFFLKLF LGIIVLLFAV MIGLKVASKM LIGKMIAGMP EKTTPVTAIT VVPTTWTPVI ETTGLVRPNQ GAVLSAQAPG TVANIFIQSG QPVKKGDVLV ELDISVEQAN LQASEAKLTT AKQIYKRYLN LYKTKSVSQQ ELDNAKANYE SLVANINALK AAIERRKIVA PFDGITGIVK VNVGQYVNVG TPIVRVEDTS SMKVDFSIAQ NELEKLFIGQ TVTATSDARL GETFGAKITA LEPAVNAATG LIDVQATFED EDSRKLLSGM FMRLRVALTT EKDQIVIPQV GISYHMYGES AYVLTALSEE DKKTLLDNEK FAYKDSIDRV YRVKQTTVFT KDRQGIYAQL KGQDIKPGDQ IVVGGQQAIT NGSLVVVVDK ETIGTQQPAK KTNL
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