Gene HS_0571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0571 
Symbol 
ID4240055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp607825 
End bp608745 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content38% 
IMG OID638104121 
ProductSPFH domain-containing protein/band 7 family protein 
Protein accessionYP_718783 
Protein GI113460716 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCTAT TTGATGGGTT ACCAATTGCT ACGATTATTT TTATTTTATT AATTGTATTT 
ATTTTATATT CAACTTTAAA AACCGTTCCT CAAGGCTATC ATTGGACAAT AGAACGCTTC
GGGCGTTATA TCCGCACTTT AACACCGGGA TTGAATTTTG TCGTACCTTT CGTGGATCGT
GTCGGTCGTC GTATTAATAT GATGGAGCAA GTCTTAGATA TTCCATCGCA AGAAGTTATT
TCTAAAGATA ATGCTAATGT GTCTATCGAT GCGGTTTGTT TTGTGCAAGT TATTGATGCT
CGTTGTGCAG CTTATGAAGT CAATCACCTC GAACAAGCCA TCATTAATTT AACCATGACA
AATATTCGTA CGGTATTAGG TTCTATGGAA TTAGACGAAA TGCTTTCTCA ACGTGATAAT
ATCAACAGCC GTTTATTAGC TATTGTAGAT GAAGCAACGA ATCCTTGGGG AATTAAAGTA
ACACGTATTG AGATTCGTGA TGTTCGTCCA CCGCAAGAGC TGATTGCAGC GATGAATGCA
CAAATGAAAG CTGAACGTAA TAAACGTGCT GATATTTTAG AGGCTGAAGG TGTGCGTCAA
GCTGAAATTT TACGTGCCGA GGGTGAAAAA CAGTCTCGAA TTTTAAAAGC TGAAGGTGAA
CGTCAAGAAG CATTTTTACA GGCTGAAGCT CGTGAACGGG CTGCTGAAGC CGAGGCGAAA
GCAACACAAA TGGTGTCAGA CGCAATTTCA AGTGGAGATA CTAAAGCAAT CAATTACTTT
ATTGCTCAAA AATACACTGA AGCATTAAAA GAGATTGGTA GTGCAAATAA TAGTAAGATT
GTACTTATGC CACTTGAAGC CGGAAATTTA ATTGGTTCTG TTGCAGGCAT TGCTGAATTG
TTAAAAGGCA ATAAACAGTA A
 
Protein sequence
MELFDGLPIA TIIFILLIVF ILYSTLKTVP QGYHWTIERF GRYIRTLTPG LNFVVPFVDR 
VGRRINMMEQ VLDIPSQEVI SKDNANVSID AVCFVQVIDA RCAAYEVNHL EQAIINLTMT
NIRTVLGSME LDEMLSQRDN INSRLLAIVD EATNPWGIKV TRIEIRDVRP PQELIAAMNA
QMKAERNKRA DILEAEGVRQ AEILRAEGEK QSRILKAEGE RQEAFLQAEA RERAAEAEAK
ATQMVSDAIS SGDTKAINYF IAQKYTEALK EIGSANNSKI VLMPLEAGNL IGSVAGIAEL
LKGNKQ