Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0547 |
Symbol | tatC |
ID | 4240030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 580178 |
End bp | 580915 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638104096 |
Product | Sec-independent protein translocase TatC |
Protein accession | YP_718758 |
Protein GI | 113460692 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0576043 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGTCG AAAAATCTCA GCCCTTAATT AGCCATTTAT TAGAACTGCG TGATAGATTA TTACGTTGTA TCGTTTTTGT GGTCGTAATA TTTCTCGCCC TAGTTTATTT TGCAAATGAT ATTTATAACT TTGTTGCCTC GCCTTTATTA GATGTATTGC CTGCCGGTGC GACAATGATT GCGACGAATA TTGCGACACC TTTCTTTACT CCGATTAAGT TAACCGCAGT AGTTGCTTTA TTTATTTCAG TGCCTTTTCT GTTATATCAA GTTTGGGCAT TTGTTGCTCC TGCCTTGTAT CAACATGAAA AGCGGTTGGT ATATCCTTTG CTGTTTTCCA GCACATTGTT GTTTTATCTC GGTGTAGCCT TTGCTTATTA TGTGGTATTC CCATTAGTAT TTGCTTTTTT AACTAAGACA GCTCCGGAAG GCGTTGCTAT CGCTACGGAT ATTAGTAGTT ATTTGGATTT TGTTTTAGCC CTATTCTTGG CCTTTGGGAT ATGTTTTGAA GTGCCGGTAG CCATTGTTTT ATTATGCTGG AGCGGTGTGA CTACGCCGGA TGATTTAAGA AAAAAAAGAC CTTACATTAT TGTTGCCGCA TTTTTTATTG GCATGCTACT AACGCCTCCT GATGCGATTT CTCAAACATT GTTGGCTTTG CCGATGTGTT TATTATTTGA GATAGGTGTT ATTTGTGCGG GTTTTTATCA GCCAAAAGAT GAACAGGAAA AATCATAA
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Protein sequence | MTVEKSQPLI SHLLELRDRL LRCIVFVVVI FLALVYFAND IYNFVASPLL DVLPAGATMI ATNIATPFFT PIKLTAVVAL FISVPFLLYQ VWAFVAPALY QHEKRLVYPL LFSSTLLFYL GVAFAYYVVF PLVFAFLTKT APEGVAIATD ISSYLDFVLA LFLAFGICFE VPVAIVLLCW SGVTTPDDLR KKRPYIIVAA FFIGMLLTPP DAISQTLLAL PMCLLFEIGV ICAGFYQPKD EQEKS
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