Gene HS_0533 details

Gene Information

• Locus tag: HS_0533
• ID: 4240016
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: +
• Start bp: 568711
• End bp: 570621
• Gene Length: 1911 bp
• Protein Length: 636 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 638104082
• Product: phage DNA primase-like protein
• Protein accession: YP_718744
• Protein GI: 113460678
• COG category: [R] General function prediction only
• COG ID: [COG3378] Predicted ATPase
• TIGRFAM ID: [TIGR01613] phage/plasmid primase, P4 family, C-terminal domain

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0606801
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAAAAT TAATTAATGC ACCTAACCTA AAGAAAATCA TTAAGCAAAA TATTCACCCA 
GCACAAGAAA TTTTGATTTT AATTGGTGAT AATCCTTGGA GTTTTTACCG CAAAAACCCG 
AGAGATGAAA AGACCAACGG GCAGGGCTCA GGCTGGATGT TATTAGCTGA CAATATCGAC 
GGAGAGAACC CGAACAGATA CAAAGAATTA CCGATTATTA TTGATGAACG GAATTATAAA 
GAATTGGATA AATTGGCACT TTTACCGAAT GAACATAAAA GTGCAAGTTT AGTAGATACT 
AGCGGGCTTT TTAAGGTTAA AAGCAATAAT AACGGTATCA CAATTAGAGA AAATGAAGAG 
CTTTTGCGAA ATATTTGCAT TAATTTAGCG AAATATACGC AAGTAAACGC ATTCAGCCTT 
AGGGACTTGT TAGGTCAACA CTTGGAGGAT TTAAGCACTT ATATTGAGCG ATTGAGAGAT 
GAATATTCAC AGGAAAGCGA GGGAGAACCC GAGCTTATCG AACTAGATGC GGACACACTC 
AAAAAAGCAA CCCCAAGCGA TAAAGCAGGG TATTTTTTGA AATGGCTGAA AAAGCCATTA 
GCCTATAATC AAACTCAAGG GCTTATTTAT TTTTACAATG GGCAAATATG GCAAGTTAAG 
GACGAAAACG CACTACAGCG AGAAATTAAA ACATTTTTTT CGGAATATAA CGCTAATTAT 
GGCAGCGTTG AAACTATAAA CAATATGATC AAATGTTTAA CCGTTGATTT ACCGCTATTT 
GATGACGAAA TAAAAGCAGC GATGGATTAT CAATTCTTAG CCTTTAAAAA TGGCGTTTTG 
AATAAACGTA CGCTTGCTTT TTTACCGCAT AAAAAAGAAT ATTACCTTAC AGCGATCAAC 
CCTTGCGATT ATCTAGAAAC ACAGACACCA ACACCGAATT TTGATAAATG GCTTGATTTT 
ATCAGCAATG ACAGCATAGA GCGGAAAAAA GCACTTTTAG CCGCTTTATA TATGATTTTA 
AATAATCGCA GTGATTGGCA ATTAACTCTT GAATTTATAG GCGAGCCGGG GAGCGGTAAA 
TCAACTTTTT TAAACGTGGC AAAAATGCTT TCAGGCGATG CTAACCATGT AGCAATTGAC 
TTAGAAACCT TGCAAAGAGA CAGCAAGACC AGAGACATGC TATTAAATAA AACTTTTCTA 
TATGCACCAG ACCAAGGGCG ATACATTGGC GAAAGTTCTG TTTTAAAAGC AATTTCCGGG 
GGAGATGAAA TTCTAGTAAA CCCGAAAGGC AAAAAAACGT TTAGCGCAAG AATAAACGCT 
ATTATTGCTA TCTGTTCTAA TACCTTGCCA ATTTATAAAA ATGACGGGGG CGGAATGGAA 
CGCAGAAGAG TGGTATTTCC TTTTTACAAG GCAATAGACG ACAGTGCAAG AGATGACAAG 
CTCACCGAAA AAATTCAAGC CGAATTAGGG GGAATTATTA GAAAACTTTA CGATGAATTC 
AAAGACCCTG AGGACGCAAA GCAAGCATTA AAGCAACAAA AAGCAAGTGC GGAGGCGTTA 
AAGATGAAAA CAGAAAACGA TCATATTTTA GAATTTATAC AAGAATTTGA ATTAATATCT 
CAACCCTCAA ATGATTGTTT GATTTTAGGC AGTAGCCGAG GCATTCCAGC ATATGAAAGC 
CCTTTAATCT TTGAGCGTTT TTACTGGTGC TATTTGTACT ATTGCTACAT CACAGGGCGG 
GAAGGGAAAT TTATATTAAA ACCAGTAGAA TTTAAAAAAG AAGTTATCCA AGCATTTAAA 
ACCATAGGCG AAAAGCCATT CACAGCCCGA CAATTAGGCG GGGGATATAA CTACACAAAC 
GCAAAATTCA AGAATAAACA TGAAACTGTT AACAAATGGC GAAACGCCTA A 

 

Protein sequence

MRKLINAPNL KKIIKQNIHP AQEILILIGD NPWSFYRKNP RDEKTNGQGS GWMLLADNID 
GENPNRYKEL PIIIDERNYK ELDKLALLPN EHKSASLVDT SGLFKVKSNN NGITIRENEE 
LLRNICINLA KYTQVNAFSL RDLLGQHLED LSTYIERLRD EYSQESEGEP ELIELDADTL 
KKATPSDKAG YFLKWLKKPL AYNQTQGLIY FYNGQIWQVK DENALQREIK TFFSEYNANY 
GSVETINNMI KCLTVDLPLF DDEIKAAMDY QFLAFKNGVL NKRTLAFLPH KKEYYLTAIN 
PCDYLETQTP TPNFDKWLDF ISNDSIERKK ALLAALYMIL NNRSDWQLTL EFIGEPGSGK 
STFLNVAKML SGDANHVAID LETLQRDSKT RDMLLNKTFL YAPDQGRYIG ESSVLKAISG 
GDEILVNPKG KKTFSARINA IIAICSNTLP IYKNDGGGME RRRVVFPFYK AIDDSARDDK 
LTEKIQAELG GIIRKLYDEF KDPEDAKQAL KQQKASAEAL KMKTENDHIL EFIQEFELIS 
QPSNDCLILG SSRGIPAYES PLIFERFYWC YLYYCYITGR EGKFILKPVE FKKEVIQAFK 
TIGEKPFTAR QLGGGYNYTN AKFKNKHETV NKWRNA