| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0488 |
|---|
| Symbol | hflC |
|---|
| ID | 4239970 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | + |
|---|
| Start bp | 528381 |
|---|
| End bp | 529268 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 638104036 |
|---|
| Product | HflC protein |
|---|
| Protein accession | YP_718699 |
|---|
| Protein GI | 113460633 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
|---|
| TIGRFAM ID | [TIGR01932] HflC protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTAAAT TCTTAACTCC TATTCTTATC GTATTGGTCG CACTGATTTA TTCAAGTGTT
GTGATTATTG ATGAAGGAAC TCGTGGCATT ATGTTACGGT TTAGTAAAGT ACATCGTGAT
GTAGATAATA AAGTGGTTGT TTATAGCCCC GGCTTGCATT TTAAAATCCC ATTTATTGAT
CACGTCAAAA TCCTTGATGC TCGCATTAGA ACTTTAGACG GTCAACCTGA TCGTTTTGTG
ACTGTAGAGA AAAAGGATCT ATTAGTTGAT TCTTATGTTA AATGGAGAAT TAGTGATTTC
GGTCGCTTTT ATACAGCCAC TAGTGGCGGA GATTATGTAC AAGCCTCGAA TCTTTTACGC
CGTAAAGTAA ATGATCGTTT GCGTTCTGAA ATTGGCTCCA GAACTATTAA AGACATTGTA
TCCGGTACTC GTGGTGAATT AATGGAAGAT GCGAAGAAAG CATTGAATAC AGGACAAGAT
AGTACTGCTG AATTGGGTAT TGAAGTCGTA GATGTTCGTG TAAAACAGAT CAATTTACCT
GATGAAGTAT CTTCTTCAAT TTATCAACGT ATGCGTGCTG AACGTGATGC AGTAGCTCGT
GAACATCGTT CACAAGGTAA AGAAAAAGCC GCATTTATTC AAGCTGATGT TGATCGTAAA
GTTGTGGTTA TTTTGGCAAC AGCAAGTAAA AAGGCACAAG AGTTGCGAGG TGAAGGCGAT
GCAACAGCAG CAAAATTATA TTCAGATGCG TTTGCTCAAG AACCGGAGTT TTTCAGTTTT
ATGCGTAGTA TGAAAGCCTA TGAAAACAGC TTTGAAGGTT CGAATAATAT GATGATTTTA
AAACCGGGTA GTGATTTCTT CCGTTTTATG GATCACCCTA AAAAGTAA
|
|---|
| Protein sequence | MRKFLTPILI VLVALIYSSV VIIDEGTRGI MLRFSKVHRD VDNKVVVYSP GLHFKIPFID
HVKILDARIR TLDGQPDRFV TVEKKDLLVD SYVKWRISDF GRFYTATSGG DYVQASNLLR
RKVNDRLRSE IGSRTIKDIV SGTRGELMED AKKALNTGQD STAELGIEVV DVRVKQINLP
DEVSSSIYQR MRAERDAVAR EHRSQGKEKA AFIQADVDRK VVVILATASK KAQELRGEGD
ATAAKLYSDA FAQEPEFFSF MRSMKAYENS FEGSNNMMIL KPGSDFFRFM DHPKK
|
|---|
| |