Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0486 |
Symbol | |
ID | 4239968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 525674 |
End bp | 526720 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638104034 |
Product | transposase |
Protein accession | YP_718697 |
Protein GI | 113460631 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0675] Transposase and inactivated derivatives |
TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGTTTAATC GAGCGTTAGC TTGGCAGAAC GAGCAATATG AACAAGACAA TAATCAAAAA TTCAGCTATT CAAAATTAAC ATCTCTACTT CCGCAATGGA AAAAAGAGCT AATTTGGCTC AAAGAATGCC ATTCTCAAGT GTTGCAACAG TCGTTAAAAG ATCTTGAAAG TGCGTTCAAA AATTTCTTTC AGCAGCGTGC AGACTTCCCA AAATTCAAGA AAAAAGGCAT AAAAGAGAGC TTTCGTTTTC CGCAAGGCTG CAAAATTCAG CCACAAAACG ACCGCTTGTA TCTGCCGAAA ATCGGTTGGG TTCGCTATCG TAATAGTCGT GAAATTGTGG GCGAAGTGAA AAATGTTACC GTCAGCCAAA AGTGCGGTCG CTTTTTTGTG AGCATTCAAA CGGAATTTGA ACACGAAATC CCGATGCATA AAGGCGGAGA AATCGGCATT GATATGGGCA TTGCACGCTT TGCAACCCTT TCCAATGGCG AATTTTTTGA GCCGATAAAT GCGTTTAAAA CCTACAAAGG TAAGTTAGCC AAACTGCAAA AACAGCTTAA AAATAAAGTG AAGTTCAGTA AAAACTGGCA AAAACTGAAA GAAAAAATCG GCAAATTACA CCATAAAATA GCTAACTGCC GAAAAGATTT TTTGCACAAA ATCTCAACCC AAATCAGCAA AAACCACGCA ATGATCTACG TTGAAGATTT GCAAGTTGCG AATATGTCCA AATCGGCAAA AGGCACAGTG GAAGCACACG GAAAAAATGT GAAACAGAAA TCAGGCTTAA ACCGTTCAAT ACGGGATCAA TCTTGGTTTG AATTTAGACG ACAGCTAGAC TATAAAACGC AATGGCTTGG CGGATTTTTA GTTGCTGTTC CAGCACAGAA TACTAGTCGA ACTTGCCCTT GTTGTGGGCA TATTGCAAAA GAAAACCGTG AAACTCAAGC TCATTTTGAA TGTGTAGAAT GTGGCTATAC AGAAAATGCC GATGTAGTGG GAGCAATGAA TGTTCTCACA CGTGGGCAAG CAATAGTCCA AGCATAA
|
Protein sequence | MFNRALAWQN EQYEQDNNQK FSYSKLTSLL PQWKKELIWL KECHSQVLQQ SLKDLESAFK NFFQQRADFP KFKKKGIKES FRFPQGCKIQ PQNDRLYLPK IGWVRYRNSR EIVGEVKNVT VSQKCGRFFV SIQTEFEHEI PMHKGGEIGI DMGIARFATL SNGEFFEPIN AFKTYKGKLA KLQKQLKNKV KFSKNWQKLK EKIGKLHHKI ANCRKDFLHK ISTQISKNHA MIYVEDLQVA NMSKSAKGTV EAHGKNVKQK SGLNRSIRDQ SWFEFRRQLD YKTQWLGGFL VAVPAQNTSR TCPCCGHIAK ENRETQAHFE CVECGYTENA DVVGAMNVLT RGQAIVQA
|
| |