| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0466 |
|---|
| Symbol | aspA |
|---|
| ID | 4239948 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | - |
|---|
| Start bp | 497743 |
|---|
| End bp | 499158 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 638104014 |
|---|
| Product | aspartate ammonia-lyase |
|---|
| Protein accession | YP_718677 |
|---|
| Protein GI | 161486693 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1027] Aspartate ammonia-lyase |
|---|
| TIGRFAM ID | [TIGR00839] aspartate ammonia-lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000107475 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAACGA GAAAAGAAAT TGATTTGCTT GGTGAACGTG ACGTTCCAGC TGATGCGTAT
TGGGGCATTC ATACATTAAG AGCGGTAGAA AATTTTAACA TTTCTAATGT AACGATTTCT
GATGTACCTG AATTTGTACG TGGTATGGTC ATGGTAAAAA AAGCAACCGC ACTTGCAAAT
GGAGAATTGG GTGCAATTCC GGATAAAATT GCTCAGGCGA TTGTGAAAGC TTGTGATGCG
ATTTTAATTG ATGGTAAATG TATGGATCAA TTTCCTTCAG ATGTATATCA AGGTGGTGCT
GGCACTTCCG TAAATATGAA TACCAACGAA GTGGTCGCTA ATTTAGCATT AGAAATTTTA
GGTCATAAGA AAGGGGAATA TGATATTTTA GATCCGATGG ATCATGTTAA TGCCAGCCAA
TCTACAAATG ATGCTTATCC GACAGGTTTC CGCATTGCTG TTTATAACAG TATTATGAAA
CTGGTAACTA AAGTACTTTA TTTACAACAA GGTTTTGAAA ATAAAGCAAA AGAGTTTTCG
AATATCTTAA AAATGGGACG TACTCAATTA CAAGATGCAG TTCCTATGAC TGTGGGGCAA
GAATTTAAAG CATTTTCTGT ATTATTAGAT GAAGAAGTGC GTAATTTAAC CCGCACGGCT
GAATTACTGT TAGAAGTAAA TTTGGGTGCA ACAGCTATCG GTACCGGCTT AAATACTCCT
CAAGGTTATT CAGAATTAGT TGTTAAGCGT TTATCTGAGG TTTCAGGTTT ACCTTGTACA
GTTGCACCAA ACTTAATTGA AGCCACTTCA GACTGTGGTG CTTATGTTAT GGTACACGGT
GCGTTAAAAC GTACTGCGGT AAAATTATCT AAAGTATGCA ATGATTTACG TTTACTTTCA
TCAGGTCCAC GTGCAGGTTT AAATGAAATT AATTTACCTG AGTTACAGGC TGGATCTTCA
ATTATGCCGG CAAAAGTCAA TCCGGTTGTA CCTGAGGTAG TCAACCAAGT TTGTTTCAAA
GTGATTGGTA ATGATACTAC CGTAACTTTT GCAGCTGAAG CGGGGCAATT GCAGTTAAAT
GTGATGGAAC CGGTAATTGG TCAAGCCATG TTTGAAAGTA TTGAAATTTT AACGAATGCT
TGCGTGAATT TACGTGATAA ATGTATTGAT GGAATTACTG CAAATAAAGA AATTTGTGAA
AATTATGTCT TTAATTCCAT CGGAATCGTA ACTTATTTGA ATCCGTTTAT TGGTCATCAT
AATGGCGATA TAGTAGGTAA AACATGTGCT AAAACAGGAC GTGGAGTGCG TGAAGTTGTA
CTGGAAATGG GCTTATTAAC AGAAGAGCAG TTAGATAATA TTCTTTCTGT GGAGAATTTA
ATGAACCCAA CCTACAAAGC TACATTACAT AAGTAA
|
|---|
| Protein sequence | MITRKEIDLL GERDVPADAY WGIHTLRAVE NFNISNVTIS DVPEFVRGMV MVKKATALAN
GELGAIPDKI AQAIVKACDA ILIDGKCMDQ FPSDVYQGGA GTSVNMNTNE VVANLALEIL
GHKKGEYDIL DPMDHVNASQ STNDAYPTGF RIAVYNSIMK LVTKVLYLQQ GFENKAKEFS
NILKMGRTQL QDAVPMTVGQ EFKAFSVLLD EEVRNLTRTA ELLLEVNLGA TAIGTGLNTP
QGYSELVVKR LSEVSGLPCT VAPNLIEATS DCGAYVMVHG ALKRTAVKLS KVCNDLRLLS
SGPRAGLNEI NLPELQAGSS IMPAKVNPVV PEVVNQVCFK VIGNDTTVTF AAEAGQLQLN
VMEPVIGQAM FESIEILTNA CVNLRDKCID GITANKEICE NYVFNSIGIV TYLNPFIGHH
NGDIVGKTCA KTGRGVREVV LEMGLLTEEQ LDNILSVENL MNPTYKATLH K
|
|---|
| |