Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0325 |
Symbol | yfeD |
ID | 4239798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | - |
Start bp | 322555 |
End bp | 323397 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638103865 |
Product | chelated iron ABC transporter, permease |
Protein accession | YP_718533 |
Protein GI | 113460471 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.057736 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTAATA CGATTGTAGC GTGGTTTACC GAGCCCTTGG TGTATCCATT TATGCAACAA GCTATTATCA TCGCACCTAT CATTGGGGCA GTGTGTGCGA TTTTATCGTG TTATTTAGTA CTTAAAGGCT GGTCACTAAT GGGTGATGCC ATTTCTCACG CTGTATTGCC GGGAATTATT CTTGCCTATG TATTAGCAAT TCCGATTGCG ATTGGGGCAT TTTGGGCAGG CATCTTTTGT GCAGTTTCCG TAGGTTATTT GAGAGATAAC AGCCGAATCA AAGAAGACAC AGTGATGGGA ATTGTTTTTT CAGGAATGTT TGCTTTCGGT TTGGTGCTGT TTTCCAAAGT GGAAACCGAT CAACATCTAA TGCACATTCT GTTCGGAAAT ATTCTAGGCA TCATTAAGCA AGAATTTTGG CAAAGTATTG GCATTGCATT ACTGGCATTT ATCCTGATTG CCTTAAAACG CAAAGACTTG TTGCTTTACT GTTTTGATCC AAGTCACACA CGAGTTGCAG GACTTAACAC CAAATTTTTA CACTATGGTT TACTGGTAAT CCTAGCGTTA GTCATCATCA GTGCAATGCA AGTTGTTGGC GTTATTTTAG TGGTGGCAAT GCTCATTACA CCTGGGATAA CAGGCTATAT TTTAGCTAAA CGCTTTGATT ATATGATGCT AATTGCCGTT TGCACAGCAG TATTCAGTGG TATTTTTGGC GTATTGCTCA GTTTTCATTT CAACGTCGCC ACAGGACCTT GTATTATCTT ACTTCAAGCA AGCCTTTTTT TATGTGCCTT AGGTTATAGT AAATATATCG CGATGCGTGT AGTTAATATT TAG
|
Protein sequence | MFNTIVAWFT EPLVYPFMQQ AIIIAPIIGA VCAILSCYLV LKGWSLMGDA ISHAVLPGII LAYVLAIPIA IGAFWAGIFC AVSVGYLRDN SRIKEDTVMG IVFSGMFAFG LVLFSKVETD QHLMHILFGN ILGIIKQEFW QSIGIALLAF ILIALKRKDL LLYCFDPSHT RVAGLNTKFL HYGLLVILAL VIISAMQVVG VILVVAMLIT PGITGYILAK RFDYMMLIAV CTAVFSGIFG VLLSFHFNVA TGPCIILLQA SLFLCALGYS KYIAMRVVNI
|
| |