Gene HS_0303 details

Gene Information

• Locus tag: HS_0303
• Symbol: iolC
• ID: 4239505
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: -
• Start bp: 302655
• End bp: 304565
• Gene Length: 1911 bp
• Protein Length: 636 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 638103843
• Product: myo-inositol catabolism protein
• Protein accession: YP_718511
• Protein GI: 113460449
• COG category: [G] Carbohydrate transport and metabolism; [S] Function unknown
• COG ID: [COG0524] Sugar kinases, ribokinase family; [COG3892] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAG AAAAAACATT AGATCTTATT TGTCTTGGAC GAGTTGCCGT AGATTTATAT 
GCTCAACAAA TCGGTTCACG CTTAGAGGAT GTGAGCTCTT TTGCTAAATA TCTCGGCGGC 
TCATCAGGTA ATGTTGCTTA TGGAACGGCT GTACAAGGTG TAAAATCATC TATGTTGGCT 
CGTGTAGGTG ATGAACATAT GGGACGTTTC TTACGTGAGG AATTGCAGCG TCTAGGTGTA 
GATACGAGCC ATTTGATTAC GGATAAAGAG CGGCTGACTG CTCTAGTGAT TTTAGGAATA 
AAAGATCAAG ATACTTTTCC ATTAATTTTC TATCGTGACA ATTGTGCAGA CATGGCAATC 
ACCGCTGATG ATTTTGATGA AGAATATATT GCTTCGGCAA AAGCACTTGC TATTACCGGA 
ACGCATTTAT CCCATCCAAA AACTCGCCAT GCGGTTTTAA CCGCACTTGA ATACGCAGGT 
CGTAATGGAA CAAAACGTTT ACTGGATATT GACTATCGTC CTGTACTTTG GGGATTAACT 
TCATTGGGTG ATGGTGAAAC TCGTTTTATT GACTCTGAAG CCGTTACACA ATCTTTACAA 
GAAGTTTTAC ATCACTTTGA TGTCTTAGTT GGTACAGAAG AGGAGTTTCA TATTGCTGGT 
GGGTCAACTG ATACGCTAAC TGCATTAAAA AATGTACGTA AAGTCAGTAA CGCTACGTTG 
GTTTGCAAAC GTGGGGCGTT AGGTTGCTCT GTCTTTGAGG GCGATATTCC GAATCATATT 
GACGGTGGTA TTAATGTATA TGGCGTACGT GTTGAAGTTT TGAATGTCTT AGGTGCAGGC 
GATGCCTTTA TGTCAGGTTT ATTACGTGGC TATATTAACG GTGAAAGTTG GGAGCAATGT 
TGTCGTTATG CAAATGCTTG CGGTGCGTTG GTCGTCTCTC GCCATGGTTG TGCCCCAGCA 
ATGCCGACTA AAGAAGAATT AGATAATTAT CTCTCACGTG CGGAATCGGT ACCTCGACCG 
GACTTAGACG AACAATTAAA CCATTTACAC CGTGTTACAA CACGCAAGCA ACAATGGCAT 
GATTTATGTA TTTTTGCCTT TGATCATCGT AAACAATTGG TTGATATGGC TGAAAAGTGC 
GGTGCAGATT TGAAACGTAT TCCAACACTC AAAACGTTAT TACTTAAAGC TGCAGAACAA 
ACCGCTCAAA AAGAGGGGAT TTATAATGGC AATGCCGGCG TTTTAGCTGA TACCACATTT 
GGTCAAGAAG CACTCAATGA AATTACTGGT AAAAAATGGT GGATTGGTCG TCCAATAGAA 
ATGCCATCTT CTCGTCCATT GCGTTTAGAG CATGGTGATT TAGGTAGTCA ACTCATTAGT 
TGGCCCGCAG AACATGTCGT TAAATGTTTA GCATTCTATC ATCCAGCAGA CAAGGCAGAG 
TTAAAAGCAG ATCAAGATGC AACATTAAAA GAAGTTTATC GTGCTTGTTG TCGTACAGGT 
CACGAATTAT TACTGGAGAT CATTTTGCCT GCGGATATGG AGCAAAAAGA AAGTTACTAC 
ACCGATATGA TTGCCCACTT CTATTCTCTC GGCATTAAAC CGGATTGGTG GAAATTACCG 
GGAGTATCCG CAAAAACTTG GGCAGACATC AGTCAAGTCA TTGAAAAAAA TGACAAACAT 
TGTCGTGGTA TTTTAATCCT TGGCTTAGAC GCACCTGAAG CAGTCTTTGA GAATGTGTTT 
AAAGCATCGG CAAACGCACC TTTAGTAAAA GGGTTTGCTG TAGGCAGAAC AATTTTTGGA 
CAACCTTCGG CTGATTGGTT AGCTGGTAAA ATTGATGATG AGCAACTCAT CAAAGAAACC 
TCAGAGCGTT ATAGAAGATT AATTAAATTA TGGAAAAATC GTAAAAACTA A 

 

Protein sequence

MKKEKTLDLI CLGRVAVDLY AQQIGSRLED VSSFAKYLGG SSGNVAYGTA VQGVKSSMLA 
RVGDEHMGRF LREELQRLGV DTSHLITDKE RLTALVILGI KDQDTFPLIF YRDNCADMAI 
TADDFDEEYI ASAKALAITG THLSHPKTRH AVLTALEYAG RNGTKRLLDI DYRPVLWGLT 
SLGDGETRFI DSEAVTQSLQ EVLHHFDVLV GTEEEFHIAG GSTDTLTALK NVRKVSNATL 
VCKRGALGCS VFEGDIPNHI DGGINVYGVR VEVLNVLGAG DAFMSGLLRG YINGESWEQC 
CRYANACGAL VVSRHGCAPA MPTKEELDNY LSRAESVPRP DLDEQLNHLH RVTTRKQQWH 
DLCIFAFDHR KQLVDMAEKC GADLKRIPTL KTLLLKAAEQ TAQKEGIYNG NAGVLADTTF 
GQEALNEITG KKWWIGRPIE MPSSRPLRLE HGDLGSQLIS WPAEHVVKCL AFYHPADKAE 
LKADQDATLK EVYRACCRTG HELLLEIILP ADMEQKESYY TDMIAHFYSL GIKPDWWKLP 
GVSAKTWADI SQVIEKNDKH CRGILILGLD APEAVFENVF KASANAPLVK GFAVGRTIFG 
QPSADWLAGK IDDEQLIKET SERYRRLIKL WKNRKN