Gene HS_0302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0302 
Symbol 
ID4239504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp300673 
End bp302619 
Gene Length1947 bp 
Protein Length648 aa 
Translation table11 
GC content36% 
IMG OID638103842 
Productsignal-transduction protein 
Protein accessionYP_718510 
Protein GI113460448 
COG category[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCTGT GTCGGGTTAA TTTCTGCTAT AGTTGTAGCT CACTTTCGAT AAAACAAAGG 
TCTCACATGG ATAGCTCACT TATTCCCAAT ATCGAATTAT TTATTGCACA GGTTCCCCCT
TTTACACATT TACCTCATGA TTTAATTCGT CTTGCTGCAC AGAATATTGA AATTCGTTAT
ATCCCCAAAG GGGAACTAAT CACAAATGAT GAAATCGATA GCCTCAATAA TAATGAAAAC
TTGTATATTG TGCGTATGGG ATCAGTGGAG CAAGTCAATA AATCAGGACA ATTAAGAGCA
AGATTGGAAA GTGGCGATTG TTTTGGTTTT AGTATTTTCA ATCATCACGA GCAAGATAAA
TATCAGGCTT ATGCGTTGGA AAATACGTTA ATTTATCAAA TCCCCTTTCA ACGCTTAAAT
GAACTTTTAA AAAAATTTCC TGAGTACGCT TCTTACTTTT CTTCTGATGC AGGAAAAAGA
CTAAACAGTT TGGCAAAAAA TAACTTTTTA AAAAATCAAA ATGATATTTT CATGAAAAAA
GTGATTGATA TTGCTAATCC TAAAATTGCT CTTGTTGATA CGAATACGAC ATTACAACAA
GCTGCGATTA GAATGTGTGA ACAACGCCGC TCTTCTGCTT TAGTGATGCA ACAAAACAAA
TTGATTGGCA TTATTCATGA TCGGGATATG ACCAAAAAAG TTGTAGCACA AGGCTTAGAT
GTAAATACGT TAGTGACAGA AATCATGAAC ATTAATCCTC CTGTGATTAG GGGTGATGAA
TTAGTACTAC AAGCTATTTC CATGATGATG CAACATAATA TTCGTAGCTT GCCGGTGATT
GTTGATGATA AAGTTCAAGG TATTTTAACC GCCACAGATC TTGTAAAACA AAACAGTATG
CAATCTGTTT TTATCATTAA CCGTATTTTT CAAGCAAATA CGCTGCCTTT GCTTGTAGAA
ATAGCTAAAC AGCAACGGGA TTTATTCCGT GCTTTATTAG AGAGAGGTGT CGCTTATAAT
AATATTATGC ACGTGATGAC ACTTATCGCT GATGCATTTG CCCGTAAGTT GCTCATGATG
GCTGAACATG AATTAGGAAC TCCGCCTTGT CGCTATGCTT GGGTTGTAGC AGGTTCACAG
GCTCGTTATG AAATGCACCC TTTATCAGAT CAGGATAATG CAATCATTTT AGAAAGAAAA
TTAACCGCAC TTGAACAGGA ATATTTTGTA CAACTAACTA AATTTGTAAA CAATGGATTG
CATGAATGCG GCTATCCTTA CTGCACGGGT AACTATATGG CAATAAATGC ACGCTGGTGT
GTTTCTCTAC AGGAATGGAA AGAAAATTTC CGTAGTTGGA TTATTGCACC TGAATTAGAA
GGTTTGCTCA ATGCCTCTGT ATTTATGGAT ATGCGAGGTA TTTACGGTGA TCTTAATTTG
GCAGATCAAC TTCAGCAATA TTTTGTCGAT TTAGTCGCAC ACAATAAACG CTTTTTAGCG
TTCTTAGTGG CAAACAGTAT TCGAGTAAAA CCCCCATTAA GTATTTTCCG AAATTTTGTT
CTTATTAAAG AAGGTGAACA TAAAAATAAA CTTAACTTGA AAAAACGTGC TATCAGTTTA
TTAGTAGATC TTGCACGAAT TTACGCACTT GCTGCCGGTT TAGCACAAAC TATGTCAACT
GAACAGCGTT TTAGACATTG TTACAAGCAA GGTATTCTGA ATAAAGAAAC CCTTAATAAT
GCACTGGAGG TATATCAATT TGTCTGCAAT ATGCGTTTTA AATATCAATC AGACGCATTG
CAACAACAGC AAGAACTAAC TAATCATATC GATCCCAGTG AGTTAAGTGC CCTTGAACGA
AATCACCTTA AAGATGCTTT TCGCTTAATT GCCCAATTTC AAGAGGCGGC AGAGATACGT
TTTTCACAAC GAGGAATAAT GAGATGA
 
Protein sequence
MQLCRVNFCY SCSSLSIKQR SHMDSSLIPN IELFIAQVPP FTHLPHDLIR LAAQNIEIRY 
IPKGELITND EIDSLNNNEN LYIVRMGSVE QVNKSGQLRA RLESGDCFGF SIFNHHEQDK
YQAYALENTL IYQIPFQRLN ELLKKFPEYA SYFSSDAGKR LNSLAKNNFL KNQNDIFMKK
VIDIANPKIA LVDTNTTLQQ AAIRMCEQRR SSALVMQQNK LIGIIHDRDM TKKVVAQGLD
VNTLVTEIMN INPPVIRGDE LVLQAISMMM QHNIRSLPVI VDDKVQGILT ATDLVKQNSM
QSVFIINRIF QANTLPLLVE IAKQQRDLFR ALLERGVAYN NIMHVMTLIA DAFARKLLMM
AEHELGTPPC RYAWVVAGSQ ARYEMHPLSD QDNAIILERK LTALEQEYFV QLTKFVNNGL
HECGYPYCTG NYMAINARWC VSLQEWKENF RSWIIAPELE GLLNASVFMD MRGIYGDLNL
ADQLQQYFVD LVAHNKRFLA FLVANSIRVK PPLSIFRNFV LIKEGEHKNK LNLKKRAISL
LVDLARIYAL AAGLAQTMST EQRFRHCYKQ GILNKETLNN ALEVYQFVCN MRFKYQSDAL
QQQQELTNHI DPSELSALER NHLKDAFRLI AQFQEAAEIR FSQRGIMR