Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0302 |
Symbol | |
ID | 4239504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | - |
Start bp | 300673 |
End bp | 302619 |
Gene Length | 1947 bp |
Protein Length | 648 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638103842 |
Product | signal-transduction protein |
Protein accession | YP_718510 |
Protein GI | 113460448 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAGCTGT GTCGGGTTAA TTTCTGCTAT AGTTGTAGCT CACTTTCGAT AAAACAAAGG TCTCACATGG ATAGCTCACT TATTCCCAAT ATCGAATTAT TTATTGCACA GGTTCCCCCT TTTACACATT TACCTCATGA TTTAATTCGT CTTGCTGCAC AGAATATTGA AATTCGTTAT ATCCCCAAAG GGGAACTAAT CACAAATGAT GAAATCGATA GCCTCAATAA TAATGAAAAC TTGTATATTG TGCGTATGGG ATCAGTGGAG CAAGTCAATA AATCAGGACA ATTAAGAGCA AGATTGGAAA GTGGCGATTG TTTTGGTTTT AGTATTTTCA ATCATCACGA GCAAGATAAA TATCAGGCTT ATGCGTTGGA AAATACGTTA ATTTATCAAA TCCCCTTTCA ACGCTTAAAT GAACTTTTAA AAAAATTTCC TGAGTACGCT TCTTACTTTT CTTCTGATGC AGGAAAAAGA CTAAACAGTT TGGCAAAAAA TAACTTTTTA AAAAATCAAA ATGATATTTT CATGAAAAAA GTGATTGATA TTGCTAATCC TAAAATTGCT CTTGTTGATA CGAATACGAC ATTACAACAA GCTGCGATTA GAATGTGTGA ACAACGCCGC TCTTCTGCTT TAGTGATGCA ACAAAACAAA TTGATTGGCA TTATTCATGA TCGGGATATG ACCAAAAAAG TTGTAGCACA AGGCTTAGAT GTAAATACGT TAGTGACAGA AATCATGAAC ATTAATCCTC CTGTGATTAG GGGTGATGAA TTAGTACTAC AAGCTATTTC CATGATGATG CAACATAATA TTCGTAGCTT GCCGGTGATT GTTGATGATA AAGTTCAAGG TATTTTAACC GCCACAGATC TTGTAAAACA AAACAGTATG CAATCTGTTT TTATCATTAA CCGTATTTTT CAAGCAAATA CGCTGCCTTT GCTTGTAGAA ATAGCTAAAC AGCAACGGGA TTTATTCCGT GCTTTATTAG AGAGAGGTGT CGCTTATAAT AATATTATGC ACGTGATGAC ACTTATCGCT GATGCATTTG CCCGTAAGTT GCTCATGATG GCTGAACATG AATTAGGAAC TCCGCCTTGT CGCTATGCTT GGGTTGTAGC AGGTTCACAG GCTCGTTATG AAATGCACCC TTTATCAGAT CAGGATAATG CAATCATTTT AGAAAGAAAA TTAACCGCAC TTGAACAGGA ATATTTTGTA CAACTAACTA AATTTGTAAA CAATGGATTG CATGAATGCG GCTATCCTTA CTGCACGGGT AACTATATGG CAATAAATGC ACGCTGGTGT GTTTCTCTAC AGGAATGGAA AGAAAATTTC CGTAGTTGGA TTATTGCACC TGAATTAGAA GGTTTGCTCA ATGCCTCTGT ATTTATGGAT ATGCGAGGTA TTTACGGTGA TCTTAATTTG GCAGATCAAC TTCAGCAATA TTTTGTCGAT TTAGTCGCAC ACAATAAACG CTTTTTAGCG TTCTTAGTGG CAAACAGTAT TCGAGTAAAA CCCCCATTAA GTATTTTCCG AAATTTTGTT CTTATTAAAG AAGGTGAACA TAAAAATAAA CTTAACTTGA AAAAACGTGC TATCAGTTTA TTAGTAGATC TTGCACGAAT TTACGCACTT GCTGCCGGTT TAGCACAAAC TATGTCAACT GAACAGCGTT TTAGACATTG TTACAAGCAA GGTATTCTGA ATAAAGAAAC CCTTAATAAT GCACTGGAGG TATATCAATT TGTCTGCAAT ATGCGTTTTA AATATCAATC AGACGCATTG CAACAACAGC AAGAACTAAC TAATCATATC GATCCCAGTG AGTTAAGTGC CCTTGAACGA AATCACCTTA AAGATGCTTT TCGCTTAATT GCCCAATTTC AAGAGGCGGC AGAGATACGT TTTTCACAAC GAGGAATAAT GAGATGA
|
Protein sequence | MQLCRVNFCY SCSSLSIKQR SHMDSSLIPN IELFIAQVPP FTHLPHDLIR LAAQNIEIRY IPKGELITND EIDSLNNNEN LYIVRMGSVE QVNKSGQLRA RLESGDCFGF SIFNHHEQDK YQAYALENTL IYQIPFQRLN ELLKKFPEYA SYFSSDAGKR LNSLAKNNFL KNQNDIFMKK VIDIANPKIA LVDTNTTLQQ AAIRMCEQRR SSALVMQQNK LIGIIHDRDM TKKVVAQGLD VNTLVTEIMN INPPVIRGDE LVLQAISMMM QHNIRSLPVI VDDKVQGILT ATDLVKQNSM QSVFIINRIF QANTLPLLVE IAKQQRDLFR ALLERGVAYN NIMHVMTLIA DAFARKLLMM AEHELGTPPC RYAWVVAGSQ ARYEMHPLSD QDNAIILERK LTALEQEYFV QLTKFVNNGL HECGYPYCTG NYMAINARWC VSLQEWKENF RSWIIAPELE GLLNASVFMD MRGIYGDLNL ADQLQQYFVD LVAHNKRFLA FLVANSIRVK PPLSIFRNFV LIKEGEHKNK LNLKKRAISL LVDLARIYAL AAGLAQTMST EQRFRHCYKQ GILNKETLNN ALEVYQFVCN MRFKYQSDAL QQQQELTNHI DPSELSALER NHLKDAFRLI AQFQEAAEIR FSQRGIMR
|
| |