Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0268 |
Symbol | recC |
ID | 4239469 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 263931 |
End bp | 267365 |
Gene Length | 3435 bp |
Protein Length | 1144 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 638103808 |
Product | DNA helicase/exodeoxyribonuclease V, gamma subunit |
Protein accession | YP_718476 |
Protein GI | 113460414 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1330] Exonuclease V gamma subunit |
TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTTACTT TGTATTATTC CAATCAATTG GAAACGCAAA AAGATATTTT GTTACATTTA ATGGATCAAC AGCCATTATC AGATCCTTTC CAAAAAGAAG TTATTTTAGT ACAAAGTGGC GGTATGGCAC AGTGGATACA GTGGCAGATT GCAGAGAAAA AAGGTATATC GGCAAATTTG TCTTTTCCTA TGCCTGCAAG TTTTATTTGG CAATTATATG TTGATAATTT ACCGCAAGTC ACAGCTTCTT CTCAATTTAG TAAAGAAAAT ATGACTTGGC GATTAATGGA AATTATTCCG CATTATATAG ATCAACCGGA ATTTTACATA TTGCGTCAAT ATTTACAGCA AAGTTACCAA TCAAGTCAGC AGCGATACTA CCAATTAGCC AGCAAAATAG CAGAGTTATT TGACCAATAT TTAGTTTATC GACCGGAATG GATTATAAGT TGGGAGCAGA ATAAAGGCGT AGAAATTATT CAGCAAATTC AGTATTACCA AAAAAATTTA TTTGTCTCAG AATCATGTTT TTCTCAAGTT GAGCAACATA TTGTTTGGCA AGGTATTTTA TGGAGAGCTT TAGTATGCTC TGTGCCAAAA GAAACACAAA AGAATGTTTT ACATCGTGCA CATTTACATT TACTTTTCTT AAAACATATT GCCGGCGAAA AACCTAAAAA TTTGCCTACG AGAATTTTTG TATTTGGTAT TTCAGCTTTA CCGAAGGTGC ATTTAGATAC TTTAAGTGCA TTAAGCCAGC ATTGCGATGT GCATTTATTT TTTAATAATG CTTGTCGTGA ATATTGGGGA GATATAATTG ATCAGAGCCA TTGGCAACGT TTGAAAGTGC GAGAGCGTAT AAGTTGGCAA GATTTCCAAC AACCACAAAA TACACAGGCT TGGTTATCCG ATGAGCAAAT ACATACTTTT GAACAAAATG TATTTGAACA AATTTATGAT GAAAAGTTAC AGGTTGGCAA TCCTTTGCTT TCCTCATGGG GAAAATTAGG ACGGGATTAT TTGTATTTAC TCACTGAACT GGAGGCTAAT GAAATCAATG CTTATGTCGA ACTTTCGGAA AAAACGTTGT TGTCGCAAGT ACAGGCACTC ATTTTAGATT TGGTTCCTTC GAAGCACAAG TTTTTAAATT TGGCAGAAAA TGACCGCTCT TTAACTTTTC ATTCTTGTTA TAGTCCAATA CGAGAGGTTC AAGCTCTACA AGATTATTTG TTACATCTAT TTAACCAAGC TCAGGATTTG ACACCTAAAG ATGTGGTAGT TATGGTTGCA GACATTGATA AATATGCACC ATATATTCAG GCGGTATTCA GTCAAGGCGA ACACTATATT CCGTACTCTA TCGCAGACAG CAAACTTTCC GAAAATGACC CTTTAGTATC TGCTTTTTTA CAATTGTTAA ATTTAAAAGA AAGTTTATTC AGTGCGGAGG AAGTGCTGAC TTTTTTGGAT CATCCTGTTA TTCGTCAGAG TTTTAATATT ACTTTAGAGG ATTTGGCACA AATTCGTCAT TGGGTTGAGC ATTCGGGTAT TCGATTCGGA TTAGAAAAAT ATCCGCAACA ATCCTTGCAA AATTATAACG CTTGGCAGGC AGGTTTGGAG AGAATGTTAC TGGGATTTGC TATGCGGGAA GAACATGGTC TATGGTTAGA TACGCTTGGC TTTGATGATA CCTATGGATT AAAAGGGCAG CTTGTCGGTT ATTTAAAGGA TTTTATTACT CGTTTGTATC AATGGCATCA ATTTTTGCAA GCAGATCACG TTATTGAAAA GTGGGAAGAA CATTTAATTG AATTAGTGTC ATCTTTTTTT GTGGTAGACG GAATGGATAT TCCGCAGCAA TACAAAACAA CTTTTAATTA TCTTATTGAC ACTATTCAAC AATTAACGGA GTTGATCCTA GATAGCTCTT TTCAGCAAGA AATAAGTGCG GAGGTTATTT ACGAAGTTTT TGTTGAACGC TTAAAAGATA TACCTAATAG CCTAAAATTT TTAATGGGGA AAGTCACTTT TTGTACGCTT CTCCCCATGC GATCAATCCC TTTTAAAGTG GTGTGTTTAC TTGGTATGAA TGATGGTGAT TATCCACGTC AACAAACGCC GAACAGCTTT GATTTAATGC AATATCATCG TAAAAAAGGC GATCGTTTTC GCCGAGATGA TGATCGCTAT TTATTTTTAG AAGCATTGAT CTCGGCACAA CAGTATTTTT ATGTGAGTTA TATTGGTCGC TCTATTATTG ATGATAGTGA ACGAGAACCT TCAGTTCTTG TTACGCAATT GTTGGATTAT ATAGCTGAAA ATATCAATGC TCAAGGTGAT CTAAAAGGGC AAGATATTCT GAAAAAATCA CTTATTCAAC AACATGCGAT GACTGCATTT AGCCGAGAAA ATTTCACCAA AAGAGACCGC TCTTTTTTTA AGCAATGGCT AGTGTTGGCA AATAAAAAAG ATAGTGGCAA TTTGGCGAAT TTTTTACAGC CGATAAATGA TACAGAGATA GTTAAAGAAA TTTCATTAAA TGATTTAATT GCGTTTATTC AGGATCCTGT TCGGTATTTT TTTGAGCAAA AATTACGTGT TTTTTTACGT AAGACAGAAC AAAATATTGC GGATACTGAA AATTTTACTT TAGATAATTT AGAGTTATAT CAAATAAAAG AAGAACTTAT TTATCTTTCT GAGCAGGAAT GGGAAGACTT TTTTGCTAGG ATGAAAATTA AGGGAATTAT GCCGCAAGGG GCGTTTGCAA AAATTTATCA GCAAAAAACA AAAAATGAGA TCATTACACT TAAATCTTTA GTTACGCCTT ATTTGGATCA AATATCGGAA CAAATTCCTG TTGACTTGAG CGTTGAAACA GAATATGGAA AAGTGTGCTT AACGGGGAGC ATTGACAGTT TATATCATCA AAAAATGCGA AGAGTAACGT GGAGAGCCTC TGCTGTCAAA ACGAAAGATA TTATCCAAAC ATGGATTTAT TATTTATTAC AAACCTTGGT TGGAGAGCCT AATTCGCAAG TTGAGCATTA CGCTTTAGAC AGCAGACTTT CTTTTGAAAA AATAGAAAAA TCTACCGCAC TTCAACAGCT TCAAACTTAT GTTGAGGCAT ATTTACTTGG ACAAGTTTCA GTGTTATTAA TGCCAATGAA AAATTTCGAT CAATATCTTC AATTGCTTTT TACTCCGAAG AGTAATAAAT GGAAAGAGGA AAAGGATATT GATTTATCTG CTTGTTTTGA ATTGTTATCA GAACTTGGCT CAGGTAGAAA AGAGAGAAAT TTTTATGTGA AAACAGATCT TTATTGGCAA AGAATATTAG CACAAACAAA ACTAGACGAT TCACATATTT TAGAAATTAA TCAACGTGTT ATACAATGGT TCGATTTAAT GTTAATGCTA AAAAGAGTTG AATAG
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Protein sequence | MFTLYYSNQL ETQKDILLHL MDQQPLSDPF QKEVILVQSG GMAQWIQWQI AEKKGISANL SFPMPASFIW QLYVDNLPQV TASSQFSKEN MTWRLMEIIP HYIDQPEFYI LRQYLQQSYQ SSQQRYYQLA SKIAELFDQY LVYRPEWIIS WEQNKGVEII QQIQYYQKNL FVSESCFSQV EQHIVWQGIL WRALVCSVPK ETQKNVLHRA HLHLLFLKHI AGEKPKNLPT RIFVFGISAL PKVHLDTLSA LSQHCDVHLF FNNACREYWG DIIDQSHWQR LKVRERISWQ DFQQPQNTQA WLSDEQIHTF EQNVFEQIYD EKLQVGNPLL SSWGKLGRDY LYLLTELEAN EINAYVELSE KTLLSQVQAL ILDLVPSKHK FLNLAENDRS LTFHSCYSPI REVQALQDYL LHLFNQAQDL TPKDVVVMVA DIDKYAPYIQ AVFSQGEHYI PYSIADSKLS ENDPLVSAFL QLLNLKESLF SAEEVLTFLD HPVIRQSFNI TLEDLAQIRH WVEHSGIRFG LEKYPQQSLQ NYNAWQAGLE RMLLGFAMRE EHGLWLDTLG FDDTYGLKGQ LVGYLKDFIT RLYQWHQFLQ ADHVIEKWEE HLIELVSSFF VVDGMDIPQQ YKTTFNYLID TIQQLTELIL DSSFQQEISA EVIYEVFVER LKDIPNSLKF LMGKVTFCTL LPMRSIPFKV VCLLGMNDGD YPRQQTPNSF DLMQYHRKKG DRFRRDDDRY LFLEALISAQ QYFYVSYIGR SIIDDSEREP SVLVTQLLDY IAENINAQGD LKGQDILKKS LIQQHAMTAF SRENFTKRDR SFFKQWLVLA NKKDSGNLAN FLQPINDTEI VKEISLNDLI AFIQDPVRYF FEQKLRVFLR KTEQNIADTE NFTLDNLELY QIKEELIYLS EQEWEDFFAR MKIKGIMPQG AFAKIYQQKT KNEIITLKSL VTPYLDQISE QIPVDLSVET EYGKVCLTGS IDSLYHQKMR RVTWRASAVK TKDIIQTWIY YLLQTLVGEP NSQVEHYALD SRLSFEKIEK STALQQLQTY VEAYLLGQVS VLLMPMKNFD QYLQLLFTPK SNKWKEEKDI DLSACFELLS ELGSGRKERN FYVKTDLYWQ RILAQTKLDD SHILEINQRV IQWFDLMLML KRVE
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