Gene HS_0265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0265 
Symbol 
ID4239466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp262220 
End bp262897 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content33% 
IMG OID638103805 
Producthypothetical protein 
Protein accessionYP_718473 
Protein GI113460411 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4795] Type II secretory pathway, component PulJ 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGCGT TGAGCTTATC AATGATGTTA TTAATGAGTG TTAGTGCATT TTATAGTTAT 
AGTCAGCAAC AAAATAAACA GATACTTTTG CATCTCTATT TACAATCAGA ATTGCAACGA
ACTATCCAAC TTTTGGGTAA GGATATTCGC CGTAGTGGAT TTAGGGCTAT TAGTGATAAA
TTGGTTCGGA GTAATTTCGA TTTATTTGAA CAAGATAAAA GCGGAAAGAG TATTGTAGTC
GCTCAAGCTG ATAATGAACC TCCGAATAGT TGCGTTCTTT TTATTTATGA TCTTGATGCT
ACCGGCTGTG TAGGTACGAC ATATCGTAAT AATGTTTGTG TAAGGAATAA ACAAAATACA
GCTCGTGAAA TTGAGCGAGA GTTATTTGGT TATCGCTTAA ATAAACAAAT GATAGAGACA
AGATTAACTT ATAAAAATTC AATTAGCGCG AATTGTAATC AAAAACAATG CCAAAGCTAT
TTACAACAAC CTGCATGTAA TAGCGGAGGG TGGGTCGATT TATTAGATGA AAATGACATA
GCCATAACTG CATTAAAATT TAATTGGATT GCTGATTACA ATGGATTGGA AGTTTATCTA
AAAGGGCATC TAAAGCGAAA TAAACAAGTC GAATATGAGA CTTCAGCCAT TATTCCTTTG
CTTAATCAAA AGAGATAA
 
Protein sequence
MIALSLSMML LMSVSAFYSY SQQQNKQILL HLYLQSELQR TIQLLGKDIR RSGFRAISDK 
LVRSNFDLFE QDKSGKSIVV AQADNEPPNS CVLFIYDLDA TGCVGTTYRN NVCVRNKQNT
AREIERELFG YRLNKQMIET RLTYKNSISA NCNQKQCQSY LQQPACNSGG WVDLLDENDI
AITALKFNWI ADYNGLEVYL KGHLKRNKQV EYETSAIIPL LNQKR