Gene HS_0263 details

Gene Information

• Locus tag: HS_0263
• Symbol: pal
• ID: 4239461
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: +
• Start bp: 260563
• End bp: 260970
• Gene Length: 408 bp
• Protein Length: 135 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 638103800
• Product: peptidoglycan-associated outer membrane lipoprotein (outer membrane protein P6)
• Protein accession: YP_718471
• Protein GI: 113460409
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins
• TIGRFAM ID: [TIGR02802] peptidoglycan-associated lipoprotein

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.00000000850084
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGCAGCTT GTAGCTCATC TGATAACGCA TCTAAAACAA ATGCTCAAAT GTTTGGCGGT 
TATTCTGTAA CTGACTTACA ACAACGTTAT AATACAGTGT ATTTTGAATT TGATAGTTAT 
GATGTGCAGG GCGAATACGC TCAAATCTTA GATGCACACT CAGCATACTT AAAGTCAACA 
CCAGCTTCTA AAGTTCTTGT TGAAGGTCAT GCTGATGAAC GTGGTACTCC GGAGTATAAC 
ATGGCATTAG GTTTACGTCG TGCTGATGCA GTAAAAAACT TTTTATTAAA TAAGGGTGTT 
CAAGCTAGTC AACTTTCAAC CCTTTCTTAT GGTGAAGAGA AACCGGCAGA GTTAGGTCAT 
AATGAAGCTG CATATTCTAA GAACCGTCGT GCTGTATTAG CATACTAA 

 

Protein sequence

MAACSSSDNA SKTNAQMFGG YSVTDLQQRY NTVYFEFDSY DVQGEYAQIL DAHSAYLKST 
PASKVLVEGH ADERGTPEYN MALGLRRADA VKNFLLNKGV QASQLSTLSY GEEKPAELGH 
NEAAYSKNRR AVLAY