Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0231 |
Symbol | sfsA |
ID | 4239747 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | - |
Start bp | 230592 |
End bp | 231308 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638103768 |
Product | sugar fermentation stimulation protein A |
Protein accession | YP_718439 |
Protein GI | 113460377 |
COG category | [R] General function prediction only |
COG ID | [COG1489] DNA-binding protein, stimulates sugar fermentation |
TIGRFAM ID | [TIGR00230] sugar fermentation stimulation protein |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAATTAC CGAATTTACA ATCAGCAACA TTACTTCGCC GTTATAAACG CTTTTTGGCA GATGTAGAAT TAAACAACGG TGAAATTTTA ACGCTTCATT GTGCCAATAC CGGTGCGATG ACAGGATGTG GTGAAAAAGG CGATACTGTT TGGTTTTCTA CTTCTGACAG CAAAACAAGA AAATACCCGC ACTCTTGGGA ATTAACTCAA CTTAAAAATG GTCAAACGGT ATGTATCAAT ACTCACCGTT CCAATCAATT AACTTTAGAG GCTTTGCAAA ATAAAATCAT CACAGAATTA GCTGAATATG ATGAGATTTT GCCTGAAGTA AAATATGGTG TAGAAAATAG TCGCATTGAT TTTTTACTCA AAGGTAAAAA CTTACCGGAT TGTTATGTCG AAGTAAAATC CGTTACGTTT GTCAAAAATC ATCTCGGTTT GTTCCCTGAT GCCGTCACAA CAAGAGGACA AAAACACTTG CGTGAGCTTA TAGCAATGAA AAAGCGGGGA CATAGAGCGG TCGTTTTTTT CGCCGGTCTT CACGACGGTT TTAATCGCTT CACCGTTGCA AAATCTATTG ATCCTGATTA TGCCGAATTA CTGCAGCAAG CAGTTAAAGA AGGTGTTGAA GTTTATAGCT ATGCCGTGAA ATTTGATTTT TCTCATCAAA AACCGACCGC ACTTTATCTA ACAAATTTAG TGAATTACCT AGAATAA
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Protein sequence | MQLPNLQSAT LLRRYKRFLA DVELNNGEIL TLHCANTGAM TGCGEKGDTV WFSTSDSKTR KYPHSWELTQ LKNGQTVCIN THRSNQLTLE ALQNKIITEL AEYDEILPEV KYGVENSRID FLLKGKNLPD CYVEVKSVTF VKNHLGLFPD AVTTRGQKHL RELIAMKKRG HRAVVFFAGL HDGFNRFTVA KSIDPDYAEL LQQAVKEGVE VYSYAVKFDF SHQKPTALYL TNLVNYLE
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