| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0199 |
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| Symbol | clpB |
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| ID | 4239714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | - |
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| Start bp | 183692 |
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| End bp | 186262 |
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| Gene Length | 2571 bp |
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| Protein Length | 856 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638103735 |
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| Product | ATP-dependent Clp protease, subunit B |
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| Protein accession | YP_718406 |
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| Protein GI | 113460345 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATAG ATAAATTTAC GACTAAATTT CAACAAGCTA TTGCTGAAGC TCAATCTTTA
GCCATAGGAA AAGACCATCA ATTTATTGAA CCAGTTCATT TAATGACCGC ACTTTTAAAT
CAGCAAGATG GTTCAATCCC GCCATTATTA ACAGCAAGTG GGGGAAATTT AGCATTATTG
CATAATGAAT TAGCTGCAGA ATTGAGCCGT TTACCACAAG TTTCGGGGAA TAATGGGGAT
ATTCAGGTTT CCAGAAGTTT GGTCAAATTA TTAAATTTAT GCGACAAACT GGCACAACAA
CGGCAAGATA AATTTATTTC CTCTGAATTA TTTTTATTAG CAATTTTTGA AGATAAAGGT
GCTTTAAGTG AAAGTTTGAA AAAGTGCGGT ATAAAACAAG AAAATTTACT ACAAGCCATT
GATAAATTGC GAGGAGGCGA AAAAGTGAAT GAACAAGGTG CGGAAGAAAA TCGTCAGGCA
TTAGAAAAAT ATACTATTGA TTTAACTGCA AGGGCAGAAA GTGGAAAATT GGATCCTGTT
ATCGGGCGTG ATGAAGAAAT TCGCCGTGCC ATTCAGGTTT TACAACGTCG TACAAAAAAT
AACCCGGTAT TAATTGGGGA ACCGGGTGTA GGTAAAACAG CGATTGTGGA AGGATTGGCA
CAACGTATCG TAAACGGTGA AGTACCTGAA GGCTTAAAAG GAAAACGTGT TCTTTCTCTG
GATATGGGAG CGTTAATTGC GGGAGCCAAA TATCGTGGTG AATTTGAAGA ACGTCTAAAA
GCGGTTCTCA AAGAATTGGC ACAAGAAGAA GGTCGTGTGA TTTTATTTAT TGATGAAATT
CACACTATGG TAGGTGCGGG AAAAACTGAC GGGGCAATGG ATGCGGGAAA TTTGTTAAAG
CCAAGTTTAG CTCGTGGTGA ACTGCATTGT GTAGGTGCAA CAACTTTAGA TGAATATCGC
CAATATATTG AAAAAGATGC CGCACTTGAA CGTCGTTTCC AAAAGGTATT TGTTGGTGAG
CCGACAGTTG AAGATACGAT TGCCATTTTA CGTGGGTTAA AAGAGCGGTA TGAAATTCAT
CACCATGTGC AAATTACCGA TCCAGCAATT GTTGCGGCAG CGACCCTTTC TCATCGTTAT
ATTTCCGATC GTCAATTACC GGATAAAGCT ATTGATTTAA TTGATGAGGC AGCCTCAAGT
ATTCGTATGG AAATTGATAG TAAGCCACAA CCTTTAGATA GATTAGAACG CCGTATTATT
CAATTAAAAT TGGAACAACA AGCGTTACAA AAAGAAGATG ATGAAGCAAG TCGCAAGCGT
TTGGATCTTC TTGAGGAAGA GCTTGGTGAA AAAGAACGTG AATATGCGGA GTTGGAAGAC
GTTTGGAAGG CGGAAAAAGC CGCACTTTCG GGTGCTCAAC ACATCAAGGC AGAGCTGGAC
AATGCCAAAA TTCAAATGGA GCAAGCTCGC CGAATCAGTG ATTTTGCGAA AATGTCTGAG
CTGCAGTATG GTCGTATTCC TGAGCTGGAA AAACAGCTTG CACAAGCTGA AAGTGCGGAA
GGAAAAGAGA TGACTTTATT GCGAAATCGT GTTACCGATG AGGAAATCGC TGAAGTGCTT
TCACGTGCGA CAGGCATTCC TGTTGCAAAA ATGATGGAGG GCGAAAAAGA TAAATTATTG
CGTATGGAAC AAGAATTGCA CAAGCGTGTT GTAGGACAAT CAGAGGCGGT TGTTGCTGTC
GCAAATGCTA TTCGTCGTAG TCGTGCCGGA TTATCTGATC CAAATCGTCC TATTGGCTCA
TTCTTGTTCT TAGGACCAAC GGGCGTAGGG AAAACCGAAC TTTGTAAAAC GCTTGCTAAC
TTTATGTTTG ATGATGAAAA TGCCATGGTG CGTATTGATA TGTCTGAGTT TATGGAAAAA
CATAGCGTTT CACGCTTAGT GGGAGCACCT CCGGGCTATG TTGGTTATGA AGAAGGCGGT
TATTTAACCG AAGCCGTTCG TCGCCGTCCG TATTCCGTAA TTTTGCTTGA TGAAGTAGAA
AAAGCCCATA GCGATGTATT CAATATTTTA TTACAAGTAT TAGATGACGG ACGTTTGACT
GATGGACAGG GTAGAACGGT TGATTTCCGT AATACTGTAG TGATTATGAC TTCAAATTTA
GGCTCTGATT TAATTCAAGG CAATAAAGAG TTGGATTATA ATGCGATGAA AGAAATTGTT
ATGTCAGTTG TAGGACAACA TTTCCGTCCT GAATTCATCA ACCGTATTGA TGAAACTGTG
GTATTCCATC CATTAGCTAA AGAAAATATT CGTGCCATTG CCACTATTCA ATTACAACGC
TTAGTGAAAC GTATGGAAAC TCATGGTTAT CAGCTTGAAT TTACCGATGC AACTTTAGAT
TTTATCGGTG AAGTCGGCTA CGATGTGATT TACGGTGCAA GACCGTTAAA ACGTGCCATT
CAACAAGAAA TTGAAAATCC ATTAGCACAA CAAATCTTAT CCGGACAATT ATTACCGGGT
AAAAAAGTCA TTGTGGATTA TGTTGATGGG AAGGTTGTTG CTCAGCAGTA A
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| Protein sequence | MNIDKFTTKF QQAIAEAQSL AIGKDHQFIE PVHLMTALLN QQDGSIPPLL TASGGNLALL
HNELAAELSR LPQVSGNNGD IQVSRSLVKL LNLCDKLAQQ RQDKFISSEL FLLAIFEDKG
ALSESLKKCG IKQENLLQAI DKLRGGEKVN EQGAEENRQA LEKYTIDLTA RAESGKLDPV
IGRDEEIRRA IQVLQRRTKN NPVLIGEPGV GKTAIVEGLA QRIVNGEVPE GLKGKRVLSL
DMGALIAGAK YRGEFEERLK AVLKELAQEE GRVILFIDEI HTMVGAGKTD GAMDAGNLLK
PSLARGELHC VGATTLDEYR QYIEKDAALE RRFQKVFVGE PTVEDTIAIL RGLKERYEIH
HHVQITDPAI VAAATLSHRY ISDRQLPDKA IDLIDEAASS IRMEIDSKPQ PLDRLERRII
QLKLEQQALQ KEDDEASRKR LDLLEEELGE KEREYAELED VWKAEKAALS GAQHIKAELD
NAKIQMEQAR RISDFAKMSE LQYGRIPELE KQLAQAESAE GKEMTLLRNR VTDEEIAEVL
SRATGIPVAK MMEGEKDKLL RMEQELHKRV VGQSEAVVAV ANAIRRSRAG LSDPNRPIGS
FLFLGPTGVG KTELCKTLAN FMFDDENAMV RIDMSEFMEK HSVSRLVGAP PGYVGYEEGG
YLTEAVRRRP YSVILLDEVE KAHSDVFNIL LQVLDDGRLT DGQGRTVDFR NTVVIMTSNL
GSDLIQGNKE LDYNAMKEIV MSVVGQHFRP EFINRIDETV VFHPLAKENI RAIATIQLQR
LVKRMETHGY QLEFTDATLD FIGEVGYDVI YGARPLKRAI QQEIENPLAQ QILSGQLLPG
KKVIVDYVDG KVVAQQ
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