| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0185 |
|---|
| Symbol | lspA |
|---|
| ID | 4239696 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | - |
|---|
| Start bp | 166327 |
|---|
| End bp | 166824 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 638103717 |
|---|
| Product | lipoprotein signal peptidase |
|---|
| Protein accession | YP_718392 |
|---|
| Protein GI | 113460331 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0597] Lipoprotein signal peptidase |
|---|
| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTAT CAAAAACAGG ACTTCCATTT CTTTGGATAA GTGCGGTTGC TTTTTTTACT
GATTTAATAA CAAAACTCGC TGTAGTAAAA AATTTTTCTT TATACGAAAG TATTAATATA
TTGCCTTTCT TTAATTTAAC TTACGTGCGT AATCACGGGG CAGCCTTTAG CTTTTTGGCT
GACCATGCAG GTTGGCAAAA ATACTTTTTT ATTTTATTGG CTTTAGTCGT TTCCTTCATG
ATTTTATTTT TCTTATATAA AAATCAAGCA ACACAAAAAC TACAAAATAC AGGCTATGCG
TTAATGGTTG GTGGAGCTTT GGCAAACGCA GCCGATAGAG CTTATCATGG CTTTGTGGTA
GATTTTTTTG ATTTTTATTG GCAACAATGG CATTACCCCG TATTTAATAT CGCTGATGTT
GCAATTTGTA TTGGTGCCGG ATTATTGGCT ATTGATGCTT TTAAGCAAAA CGATAAAAAA
GAGAGCAAGC AGAACTAA
|
|---|
| Protein sequence | MNLSKTGLPF LWISAVAFFT DLITKLAVVK NFSLYESINI LPFFNLTYVR NHGAAFSFLA
DHAGWQKYFF ILLALVVSFM ILFFLYKNQA TQKLQNTGYA LMVGGALANA ADRAYHGFVV
DFFDFYWQQW HYPVFNIADV AICIGAGLLA IDAFKQNDKK ESKQN
|
|---|
| |