| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0133 |
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| Symbol | oxaA |
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| ID | 4239641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | - |
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| Start bp | 119511 |
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| End bp | 121136 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638103662 |
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| Product | putative inner membrane protein translocase component YidC |
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| Protein accession | YP_718337 |
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| Protein GI | 113460279 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0580569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTCTA AACGCAGCCT ATTATTTATG GCACTTCTTT TCATTTCCTT CCTTATTTAT
CAGCAATGGC AAGTAGACTA TAACACGCCT AAGCCGGAAA TGACTGAACA AGCTCAGGTT
TCTGAAGTAA ACTCAACCGC ACTTACAGCA ACGTCAGATA TTGCTAATGA TACACAGGCT
AAAGGTCGTG TTATTACATT AGAAAATGAT GTTTTCCGTT TAAAGGTAAA TACTTTGGGG
GGGGACGTGA TCGGTTCTGA ATTATTGAAC TATGATGCAG AATTACATTC TTCAGCACCT
TTCGTCTTAT TACAGAACAA TGCGGATAAA GTATATATTG CACAAAGCGG CTTAGTCGGA
AAAAATGGCA TTGATAGTCG TGCTGGTCGT GCAAATTACC AAGTTGAAGG TGATGTATTT
AAGTTAGCAG AAGGTCAGCA GGAATTAAAA GTGCCTTTGG TCTTTGAGAA AGATGGTGTG
ATCTATCGTA AAGTCTTTGT ATTAAAACCT GGGTCTTACG CATTAGAGGT CAATTTTGAA
ATTACCAACC AAAGCCCAAA ACCGATTGAA GTAGTTCCTT ATGCACAATT AACTCATACG
CTAGTTGAAA GTTCAGGTAG CATGGCAATG CCGACTTATA CCGGCGGTGC TTATTCATCG
TCAGAAACCA ACTATAAAAA ATATAGTTTT GAAGACATGG AAAAAGCAGA TTTAGATATT
CATACCAAAG CCGGTTGGGT TGCCTTGTTG CAACATTATT TCGTCTCCGC TTGGATTCCT
AATCAAGATG CTAATAATAC CTTGTACACG CTGACAAATA CTAAGAAACA CTTGGGTTCT
ATTGGTTATC GATCTGCTCC GATTGTAATA GAAAACGGTG CAACTGAAAC TATTCATACT
CAATTATGGA CTGGTCCGAA ATTACAAGAT CAAATGGCTG ATGTGGCTAA TCATTTGGAT
TTAACCGTTG ATTATGGTTG GGCTTGGTTT ATTGCGAAAC CTCTATTTAA ATTGCTAACC
CTAATCCAAT CTCTTGTACA AAACTGGGGG CTGGCAATTA TTGGTGTCAC TTTAGTAGTA
AAAGCAATTC TATACCCGTT AACCAAAGCA CAATATACGT CGATGGCAAA AATGCGTATG
TTACAACCTA AATTGCAAGA AATGCGTGAG CGTTTTGGTG AAGATCGCCA ACGTATGAGC
CAAGAAATGA TGAAACTTTA CAAAGAAGAG AAAGTCAATC CTCTTGGCGG TTGCTTACCA
ATTCTTCTAC AAATGCCAAT TTTCATTGCT TTGTATTGGA CATTTATGGA AGCCGTTGAA
TTACGTCATG CCCCATTCTT TGGTTGGGTA CAAGATTTAT CCGCACAGGA TCCGTATTTT
ATCTTACCGA TCCTAATGGG TGCCTCAATG TTCCTATTGC AAAAAATGTC ACCAACACCT
GTTGCCGATC CGATGCAACA AAAGGTGATG ACGTTTATGC CATTAATTTT CATGGTGTTC
TTCTTATTCT TCCCCGCAGG CTTAGTATTA TATTGGTTAG CCTCTAACCT TATTACTATT
GCACAACAAT GGTTAATTTA TCGTGGCTTG GAGAAAAAAG GCTTACATAC CAGAGTAAAA
AAATAA
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| Protein sequence | MDSKRSLLFM ALLFISFLIY QQWQVDYNTP KPEMTEQAQV SEVNSTALTA TSDIANDTQA
KGRVITLEND VFRLKVNTLG GDVIGSELLN YDAELHSSAP FVLLQNNADK VYIAQSGLVG
KNGIDSRAGR ANYQVEGDVF KLAEGQQELK VPLVFEKDGV IYRKVFVLKP GSYALEVNFE
ITNQSPKPIE VVPYAQLTHT LVESSGSMAM PTYTGGAYSS SETNYKKYSF EDMEKADLDI
HTKAGWVALL QHYFVSAWIP NQDANNTLYT LTNTKKHLGS IGYRSAPIVI ENGATETIHT
QLWTGPKLQD QMADVANHLD LTVDYGWAWF IAKPLFKLLT LIQSLVQNWG LAIIGVTLVV
KAILYPLTKA QYTSMAKMRM LQPKLQEMRE RFGEDRQRMS QEMMKLYKEE KVNPLGGCLP
ILLQMPIFIA LYWTFMEAVE LRHAPFFGWV QDLSAQDPYF ILPILMGASM FLLQKMSPTP
VADPMQQKVM TFMPLIFMVF FLFFPAGLVL YWLASNLITI AQQWLIYRGL EKKGLHTRVK
K
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