Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0089 |
Symbol | ribB |
ID | 4239598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 82323 |
End bp | 82961 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638103621 |
Product | 3,4-dihydroxy-2-butanone 4-phosphate synthase |
Protein accession | YP_718296 |
Protein GI | 113460238 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
TIGRFAM ID | [TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCAGT CATTATTATC TCAGTTTGGT ACATCTGAAG AACGAGTTAA ACGTGCGATT GAAGCTTTCA AAAGAGGGAA CGGAGTTCTT GTCCTTGATG ACGAAGATCG GGAAAATGAG GGTGATCTTA TTTTTCCGGC TGAAACAATC ACAGTTGAAC AGATGGCAAA ATTAATTCGT TATGGGAGCG GAATTGTTTG CTTATGTATC ACTGATGAAC TTTGCCAACA GCTCGATTTG TCACCGATGG TACAAAATAA CACAAGTATT AATCAAACAG CGTTTACTGT CAGTATTGAA GCGGCACAAG GTGTATCTAC CGGTGTATCT GCACAAGATC GTGTAACGAC TATTCAAGCC GCCATTGCTG ATAATGCTAA ACCGCAAGAC CTTAGCCGTC CGGGGCATGT ATTTCCATTA AGGGCTAAAA AGGGCGGTGT GTTAGCACGG CGGGGACATA CTGAGGCCGC AGTTGATCTG GCTTCTTGGG CAGGTCATAA GCCTGCCGGG GTAATTTGTG AAATAACCAA TGATGATGGG AGTATGGCAA GAACACCGGA GATCGTAGAA TTTGGCAAAA AATTTAATTA CCCTGTGGTA ACAATTGAGG ATCTTGTCCG TTATGCCTCA AATAAATAG
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Protein sequence | MNQSLLSQFG TSEERVKRAI EAFKRGNGVL VLDDEDRENE GDLIFPAETI TVEQMAKLIR YGSGIVCLCI TDELCQQLDL SPMVQNNTSI NQTAFTVSIE AAQGVSTGVS AQDRVTTIQA AIADNAKPQD LSRPGHVFPL RAKKGGVLAR RGHTEAAVDL ASWAGHKPAG VICEITNDDG SMARTPEIVE FGKKFNYPVV TIEDLVRYAS NK
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