| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0058 |
|---|
| Symbol | rpsJ |
|---|
| ID | 4239566 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | + |
|---|
| Start bp | 63132 |
|---|
| End bp | 63443 |
|---|
| Gene Length | 312 bp |
|---|
| Protein Length | 103 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638103589 |
|---|
| Product | SSU ribosomal protein S10P |
|---|
| Protein accession | YP_718264 |
|---|
| Protein GI | 113460207 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0051] Ribosomal protein S10 |
|---|
| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000000415336 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAACC AAAGAATCCG TATCCGCTTA AAAGCTTTTG ATCATCGTTT AATTGATCAA
TCTACAGCGG AGATCGTAGA AACAGCTAAA CGTACTGGTG CACAAGTCCG TGGGCCAATT
CCTTTGCCAA CTCGCAAAGA ACGTTTCACA GTATTGATTT CTCCACATGT AAATAAAGAT
GCACGTGATC AATATGAAAT TCGCACACAT AAACGTTTAG TCGATATTGT AGAGCCAACA
GAAAAAACTG TTGATGCATT AATGCGTTTA GATTTGGCTG CCGGCGTTGA CGTGCAGATC
AGCCTAGGTT AA
|
|---|
| Protein sequence | MQNQRIRIRL KAFDHRLIDQ STAEIVETAK RTGAQVRGPI PLPTRKERFT VLISPHVNKD
ARDQYEIRTH KRLVDIVEPT EKTVDALMRL DLAAGVDVQI SLG
|
|---|
| |