Gene HS_0038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0038 
SymboltrkA 
ID4239546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp39742 
End bp41118 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content37% 
IMG OID638103569 
Productpotassium transporter peripheral membrane component 
Protein accessionYP_718244 
Protein GI113460187 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATTA TTATTCTGGG TGCCGGTCAG GTAGGAACAA CACTTGCTGA AAATTTAGTG 
AGTGAAGACA ATGATATAAC GTTAATTGAT AATGACGCTG TTCGTTTGGC ACATTTACAA
GATAAACATG ATTTAAAAGT GATTAACGGC TCTGCATCAT CACCGAGAAT TTTACGAGAA
GCAGGTGCAC CTGACGCAGA TTTATTAGTA GCTGTTACAA GTTCAGATGA AACGAATATG
ATTTCTTGCC AAATAGCTTA TACCTTATTT AACACTCCAA CAAAAATTGC ACGTATTCGT
GATGCAGAAT ATTGGCGTGA AAAAGATAAA TTATTTCAAC CGCACATGAT CCCTATTGAT
CATATCATTT CACCGGAACA ACTTGTTACT GAAGAAATCT CTCGCTTAAT TGATTACCCC
GGTGCATTAC AAGTAGCTCA TTTAGCTAAT GAAAATATTA GTATTGTTGT AGTAAAAGCC
TATTATGGTG GCCCTTTGGT TGGCTATTCT CTTTCCGCCC TAAAAGACCA TATGCCGCAT
ATTGATTGCC GTATTTTATC TATTTTGCGT CAAGATAAAG TGATTCGTCC GCAGGGTTCG
ACAATTATTG AAGCCGGCGA TGAGGTAACT TTTATTTGTG CGACAATTTA TATTAAAGCG
GTCATGTCAG AACTGCAACG CTTGGAAAAA CCTTATAAAC GAGTGATGAT TATTGGGGGA
GGTAATATCG CCGTGGGTGT TGCCAAAAAA CTGGAAAATC ACTGCACAGT CAAACTTATT
GAACGCAATG CAGAGCGTGC AACATCACTT GCGGAAAAAT TATCTAAAAC CTTAGTATTG
CATGGAGATC CTTCCGATAA ATCGTTATTG TTTGAAGAAC ATATTGAAAA CATTGACGCT
TTCTTATGTT TAACCAGTGA TGATGAAACA AATATTATGT CGGCATTCTT GGCTAAGCAT
CTTGGAGCTA AAAAAGCAAT GGTGTTAATA CAGCGTATGG CGTACATCAA TTTAGTTCAA
GGCGGAACAA TTGATATTGC AGTTTCTCCA CAACAAGCTA CCATCTCCGC TTTACTGGGG
CATGTACGTA AAGGAGATAT TGCAAATGCG ATCTCTTTGC GTCATGGCAT TGCTGAAGCA
TTGGAAATTA TTGTGCATGG CGATGAAAAA ACATCACAAG TAATTGGACG TAAACTTAGA
GAGTTAAAAT TACCCAATGG TGCAATTATC GGTGCAATTT TGCGACAAGA TACTGTGATC
ATCGCAAGAA AAGATGCAGT AATTGAAAGT GGCGATCATG TCATTGTTTA TTTAAGTGAT
AAAAAATATG TAACAGAAAT AGAGAAACTT TTTCAACCTA ATGCTTTCTT TATTTAG
 
Protein sequence
MRIIILGAGQ VGTTLAENLV SEDNDITLID NDAVRLAHLQ DKHDLKVING SASSPRILRE 
AGAPDADLLV AVTSSDETNM ISCQIAYTLF NTPTKIARIR DAEYWREKDK LFQPHMIPID
HIISPEQLVT EEISRLIDYP GALQVAHLAN ENISIVVVKA YYGGPLVGYS LSALKDHMPH
IDCRILSILR QDKVIRPQGS TIIEAGDEVT FICATIYIKA VMSELQRLEK PYKRVMIIGG
GNIAVGVAKK LENHCTVKLI ERNAERATSL AEKLSKTLVL HGDPSDKSLL FEEHIENIDA
FLCLTSDDET NIMSAFLAKH LGAKKAMVLI QRMAYINLVQ GGTIDIAVSP QQATISALLG
HVRKGDIANA ISLRHGIAEA LEIIVHGDEK TSQVIGRKLR ELKLPNGAII GAILRQDTVI
IARKDAVIES GDHVIVYLSD KKYVTEIEKL FQPNAFFI