Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0028 |
Symbol | |
ID | 4239536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 28889 |
End bp | 30076 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638103559 |
Product | permease (transport protein) |
Protein accession | YP_718234 |
Protein GI | 113460177 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1914] Mn2+ and Fe2+ transporters of the NRAMP family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.37673 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAACA ATAACCGCAG TGCCCTTATT GGAGCGGCAT TTTTAATGGC GACTTCAGCC ATTGGACCGG GTTTCTTAAC CCAAACAGCG ACATTTACTC AAAACTTATT TGCCAGTTTT GGGTTTGTGA TTTTGCTCTC TATTTTGCTT GATATCGGGG CTCAATTAAA TATTTGGCGA ATTATTGCCG TTTCCGAAAA GAAAGCCCAA GATGTTGCTA ATGCAGTATT GCCGGGTGCT GGGTATTTTC TCGCATTGCT TATTGTGATG GGTGGTTTAG CGTTTAATAT TGGTAATGTG GGTGGTGCAG GCTTAGGTTT GAATATTCTT ACTGGAGTAT CTCCTGAAAA GGGAGCAATT ATCAGCGGTA TTATTGCTGT TGGTGTATTC CTATTTCGTG AAGCTGGTAA AGTAATGGAT AGATTTGCTC AAATTATGGG GTTTGTGATG ATCGCCTTGA CTGTCTTTGT GGCAGTAAAA GCCAACCCAC CTATCGCTGA TGCCGTTGTT CACACCTTCT TACCTGAAAA ATTAGATGTT ATTGCGATTG TCACCCTTGT GGGAGGTACA GTTGGTGGCT ACATTACTTT TGCCGGAGCT CACCGTTTAT TAGATGCGGG CATTAAAGGA AAAGAAAACT TAAAAGAAGT GAGCAGAAGT TCTGTTTCTG CAATCTTAAT TGCTTCCATT ATGCGTGTGG TGCTGTTCCT TGCGGTATTG GGTGTTGTTT CAATGGGTGT CCAACTGGAT CCAAAAAACC CAGCCTCAAC ACCATTTGCT TACGTTGCCG GTAATGTCGG GTTAATGATT TTCGGTATCG TAATTTGGGC TGCATCTATT ACCTCTGTGA TTGGTGCGGC GTATACCTCT GTATCTTTCA TTACCTCATT TTCACCATTC ATCGAAAAAC ACAAAAATTG CTTTATCGTG GCATTTATCG TGATTTCTAC CGTTGTGCTT GCTACCATAG GCAGACCAGC CCAAGTGCTA GTGTTCGTAG GAACATTAAA TGGTTTAATC TTACCCATCT CACTCGGTTT AGTCTTATTA GCAGCTTATA AAACAAATAT TGTTGGTAAC TATAAACACC CTATTTGGAT GACAATTGCA GGGGCTATTG TTGTCGTAAG CATGGCAATT TTAAGTATTA TAACTCTCTC AAAATATGTT TTTGGGCTGT TTACTTAA
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Protein sequence | MSNNNRSALI GAAFLMATSA IGPGFLTQTA TFTQNLFASF GFVILLSILL DIGAQLNIWR IIAVSEKKAQ DVANAVLPGA GYFLALLIVM GGLAFNIGNV GGAGLGLNIL TGVSPEKGAI ISGIIAVGVF LFREAGKVMD RFAQIMGFVM IALTVFVAVK ANPPIADAVV HTFLPEKLDV IAIVTLVGGT VGGYITFAGA HRLLDAGIKG KENLKEVSRS SVSAILIASI MRVVLFLAVL GVVSMGVQLD PKNPASTPFA YVAGNVGLMI FGIVIWAASI TSVIGAAYTS VSFITSFSPF IEKHKNCFIV AFIVISTVVL ATIGRPAQVL VFVGTLNGLI LPISLGLVLL AAYKTNIVGN YKHPIWMTIA GAIVVVSMAI LSIITLSKYV FGLFT
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