Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0021 |
Symbol | |
ID | 4239529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 22388 |
End bp | 23446 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638103552 |
Product | Zn-binding dehydrogenase |
Protein accession | YP_718227 |
Protein GI | 113460170 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
TIGRFAM ID | [TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0554419 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGATTA ACTTTGTTAA AGAGGGAAAC ATTATGAGCA AATACGTAAG ATCAGTTTGT CTCGTGGAAC CTAAGAAGGT TGATATAAAG ACCGTGTTGT ATCCTAAAAA AGGTGAGTGT GATGTTCTGA TCAAAGTAGA GAGTATAGGA ATCTGCGGAT CTGATATTGG TGCATTTAGA GGTACTAATC CGCTGGTAAC TTACCCTAGA ATTTTAGGAC ATGAAATTGT TGGTACAGTC ATTGAATCTG GTGTTGGTAT GCCAAAAAAT ATTAATATAG GTGATCGTGT AATTCTCGAA CCTTACATTT ATTGTGGACA TTGCTATCCT TGTTCAATCA GTAGAACAAA TTGCTGTGAG GCACTAAAAG TTTTGGGGGT ACATATTGAT GGAGCAATGC AAGAAATTGT TAGACATCCA GCTCATATGC TTATTAAAGC ACCTGATATA CCGATACATG AACTGGCTTT AGCAGAACCT TTAACTATTT CATTACATGC AATTCGTAGA ACCAAAGTAA AAGCCGGTGA ACACGTTGCT ATCATCGGTG CTGGTGCGAT TGGACTGATG GCCGCATTAG TTGCCAAAGC TTATGGTGCG ACACCAATTT TAATTGACAT TTTAGACAAG CGATTAGATT ACGCAAAATC TATTGGCATT CCAAATATAA TTAACCCAGC AAAAGAAAAT GATCTTGAAG CTATTAAATC CATTACTAAC GGAAGAATGG CTGAGGTTGT TATTGAAGCG TCAGGAGCAA ATATTGCTGT ACAAAATACG CTTAAATATA CTTCTTTTGC AGGACGTATT GCTTTAACTG GATGGCCGAA AAACGAAACG CCACTACCAA CTAATTTAAT TACCTTCAAA GAACTTAACA TTTATGGAGC AAGAACAAGC AAGGGGGAAT TTGAAGAAGC ATTAAAACTT TTAGAATCGA GAAAGATTGA ACCGAAGAAT ATTATTAGTA AGGTAATTAC ATTTGATGAA ATTCCTCACT ACATCGAAGA GCTTTCAGAA AATCCTGATG ATTATTTAAA AATCATTGCT GTATTTTAA
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Protein sequence | MSINFVKEGN IMSKYVRSVC LVEPKKVDIK TVLYPKKGEC DVLIKVESIG ICGSDIGAFR GTNPLVTYPR ILGHEIVGTV IESGVGMPKN INIGDRVILE PYIYCGHCYP CSISRTNCCE ALKVLGVHID GAMQEIVRHP AHMLIKAPDI PIHELALAEP LTISLHAIRR TKVKAGEHVA IIGAGAIGLM AALVAKAYGA TPILIDILDK RLDYAKSIGI PNIINPAKEN DLEAIKSITN GRMAEVVIEA SGANIAVQNT LKYTSFAGRI ALTGWPKNET PLPTNLITFK ELNIYGARTS KGEFEEALKL LESRKIEPKN IISKVITFDE IPHYIEELSE NPDDYLKIIA VF
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