Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0002 |
Symbol | pncB |
ID | 4239509 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 1927 |
End bp | 3324 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638103532 |
Product | putative nicotinate phosphoribosyltransferase |
Protein accession | YP_718207 |
Protein GI | 113460151 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1488] Nicotinic acid phosphoribosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.485166 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATACAT CAAATTTCAC TAATTTAATC TTAAATGTAG ACAGCTATAA AGCCTCGCAT TGGTTGCAAT ATCCCAAAGG AACAGAATAT ATTTCCTATT ATATTGAAGC TCGTCGAGAA AGTTTTGATG TAGTGATGTT CGGTTTACAG GCCTTTATCA AAGAATATTT GCTTAAACCT ATTTGCCAAC AAGATGTTGA TGAAGCAGAA ATTGTATTAA AAGCACATGG ATTGCCTTTT TATAGAGATG GTTGGCAACA TCTAATACAT AAACATCAAG GTTATTTACC CTTAAAAATT GAAGCTGTAC CAGAAGGAAC GGTCTTACCT GTTGGTAACG TGGTTTGTCA AATAACCAAT ACAGATCCTG ATTTTTTTTG GTTAGTCGGC TATTTAGAAA CCGCACTTTT AAGGGCAATT TGGTATCCTT CCACTGTTGC AAGTCTTTCC TATTTTTGTA AAAAGCAAAT TAGACAAGCT TTAATAAAGT CTGCAAATGA TCTATCCGGT TTAGACTTTC AATTACATGA TTTTGGTGCA CGAGGTGCAT CAAGCCTCGA AACTGTTGCG TTGGGGGGAT TAGCTCATTT AGTTAATTTC AAAGGAACAG ACAGTGTTTC TGCCTTAATT GCTGCAAAAC GCTGGTATAA CATTAATGAA ATGCCTGCAT TTTCTATTCC TGCTGCCGAA CATAGCACTA TCACTTCTTG GGGTAAAGAT CGGGAAATAA ATGCTTACCA AAATATGATT GAATGCTTTG GTGGAGAGGG AAAACTTTAT TCCGTAGTAT CGGATAGTTA TGATCTTTGG CATGTCTTGG AACATATTTG GGGCGAGAAA TTAAAAGATT TGGTGATCGA AAAAGGCGGA AGATTGATTA TTCGACCTGA CAGTGGTAAT CCTATAGAGA TTATTTGCAA AACCCTAGAA ATTTTAGCAA ATAAATTTGG TTATATTCTT AATCAAAAAG GCTACAAAGT TTTACCTGAT TGTCTTCGCA TTATCCAAGG AGATGGCATC AATGCTCAAA GTCTACCAAA AATTCTTGAT GCTGTTATGC AAAAAGGATT TAGTGCCGAG AATGTTAATT TCGGCATGGG GGGAGGACTG CTGCAACAAG TCAATCGTGA TACCATGAGT TGGGCAATGA AAGCTAGTGC CATTTGTATT AATGGACAGT GGCAAGAGAT TTATAAGGAT CCCATTACCA GCCAAAGTAA GCGTTCTAAA AAAGGTGTTT TGGCTTTAGT CAAACAGGGA AGTGATTGGT TAACAATTAA ACAATCTGAG TTAAATGGAC AAACTAATCA GTTACAAACC GTTTTTTTCA ATGGAAAACT TTTTATCGAA GAAAACTTAA CGGAAATCCG CTTGCGGACC ACGTCCTTTT TAGTATGA
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Protein sequence | MYTSNFTNLI LNVDSYKASH WLQYPKGTEY ISYYIEARRE SFDVVMFGLQ AFIKEYLLKP ICQQDVDEAE IVLKAHGLPF YRDGWQHLIH KHQGYLPLKI EAVPEGTVLP VGNVVCQITN TDPDFFWLVG YLETALLRAI WYPSTVASLS YFCKKQIRQA LIKSANDLSG LDFQLHDFGA RGASSLETVA LGGLAHLVNF KGTDSVSALI AAKRWYNINE MPAFSIPAAE HSTITSWGKD REINAYQNMI ECFGGEGKLY SVVSDSYDLW HVLEHIWGEK LKDLVIEKGG RLIIRPDSGN PIEIICKTLE ILANKFGYIL NQKGYKVLPD CLRIIQGDGI NAQSLPKILD AVMQKGFSAE NVNFGMGGGL LQQVNRDTMS WAMKASAICI NGQWQEIYKD PITSQSKRSK KGVLALVKQG SDWLTIKQSE LNGQTNQLQT VFFNGKLFIE ENLTEIRLRT TSFLV
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