| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1283 |
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| Symbol | |
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| ID | 8709981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1533352 |
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| End bp | 1534083 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646483371 |
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| Product | thiamine biosynthesis protein ThiF family protein |
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| Protein accession | YP_003374472 |
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| Protein GI | 283783718 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATTA ATAAAATTTA CGACAACCTG CAGGAGCTTG AGGTGGAACG CACTAGCCGC
CACTTGCTCC TGCCGGGCTT TACGCATGAA CATCAGCAGT TACTTCGCGA TGCGAAAATC
TGCATGGTCG GAGCAGGTGG ACTTGGTTCG CCATGCTTGC TTTCGCTTGC TGCAGCAGGA
GTTGGCGAAA TTACGATTTG TGATGACGAC GTTGTTGAGC TTTCTAATTT GCAAAGGCAG
ACTTTATATA CTGTCGATCA GTGTGGCAAA TCTAAAGTGC AACTTGCGGC TAAGCGTCTG
CAAGCGTTAT CTCCGGGTTT AAAAATCAAC CTTGTAGATA GATTTAATGA AGACAACGCA
AAGCAACTTG TAGAAAGTCA CGACTTAATA ATTGATGGTT GCGATAATTT TGCTACTCGC
TTTTTGATTG CGGATGCTGC TTGGAGCGCT GGTACGCCGG AAGTTTACGG ATCGGTGCTT
TATTATGAAG GTCAAGTAAG CGTTTTTATG CCTGGGGAGG GACCAGGATT GCGCGACTTG
TACCCTTGTC CTCCGCCTAA AGAAAAAGTG CCAAAATCGG CAGTATTGGG CGCGACTGCG
GCTATTGTTG GTGCAATGAT GGCAACTGAA GCAATCAAAC TCATAACCGG TATTGGCACG
CCGCTTATTG GTGTTTTGGC GCGCTACAAT GCTCTGGATA ATTCTTTGCG TCGTTTTAAG
TTCAGCGTGT GA
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| Protein sequence | MTINKIYDNL QELEVERTSR HLLLPGFTHE HQQLLRDAKI CMVGAGGLGS PCLLSLAAAG
VGEITICDDD VVELSNLQRQ TLYTVDQCGK SKVQLAAKRL QALSPGLKIN LVDRFNEDNA
KQLVESHDLI IDGCDNFATR FLIADAAWSA GTPEVYGSVL YYEGQVSVFM PGEGPGLRDL
YPCPPPKEKV PKSAVLGATA AIVGAMMATE AIKLITGIGT PLIGVLARYN ALDNSLRRFK
FSV
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