| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1216 |
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| Symbol | |
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| ID | 8709766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1444879 |
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| End bp | 1447182 |
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| Gene Length | 2304 bp |
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| Protein Length | 767 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 646483304 |
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| Product | hypothetical protein |
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| Protein accession | YP_003374410 |
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| Protein GI | 283783656 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000000114683 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGTTTAATT CGCATATATT TAGCCGTTTC CTTCGACTAG TGCGCTCAAT TCGCCGTTCG
TTATTTGCTT TTTTCGTGGC AATTACAATG TTGCTTGCTA CTTTTGTGAT TGCTCCAACT
TATGCGTTGA GTGCTGGTGA GAATACTACT GTTACTGAGA AGGTTGAAGG TGCTAAGTCT
GGTTCTGCTA AAAATGATGA TGAGAATAAG CAGCAGACTA AGCAGAGTGA ATCTATTAAT
ACTGAGCCTA ATAAGAAAAA TACTGATACT TCAAGTACTT TAAATAAAGA TAATAAGGAA
TCGAAGCCTG TTGAAAAGCA GCAGAATGCA GATGTGTCTG TCGATAAAGC TAAGTCTGAG
ACTGCTGTAA ATAAAAAAGC TAAAGATGCT AAAAATAAAG CTGCTGATTC TACGAAAGCT
GTTAAAGGCA CTGACAGAGG TGCGAATGAA GATCCTCAGC TTCCGAAAGA GTGCAAGGGG
AAGAAGAGTT TAAGTTCATG CTACAAGATT AGCTACAATA TTGGTAGTCC TACTGTAGAT
AATGATGGTA AGACTATTTT AATAAAGCGT GGTGAAACTA GAACTATTAC CCCAGAGTTC
AAATTAAGAA AGACTAGAAA ACAAACCGGT GTACCAGGCG GCTTGTGGTT TACGTTAGAA
AAAGATGGTG AAGATCCTGT ACCAAGTTGG GCGAATTTTG AAAAAGATAA TGGTGCCACT
AAAGTTAAGG ATACTAGTAA AGATAAAACA GGCTTTGATG GTTCTGTTAC GTTGCGCCCA
GGCAAATGGG ATCGCGGTAG TTATACATTC AAAATTGGCA TATACCACCC TACTGATACA
AAAGGTGAAA AAATTGATGT AAGTGTAAAA ATTGACGAAT CTGATATATC AAAAAATGAT
TTATCGCTGA GCTTATACGA TTTTAGGAAA GAGAATGATA AAGTTCCTGT AAGCGATGAC
AAAATTATTA TAAAACAGAA GTCTAAAGCT ATTACTAATA AGCTTTTTAT TGATTCTCAA
TCCAAAGAAG AGCCTGGTTA TATTCATCAC CATATGATTT GCCATAAAGA GACTAGTACT
AATGGTAGTG CAGAAACTAG TGATAGTGCC GATAGTTATA CGTTAGACAG TGTTAATGGT
TTGAGTTTAG GTACGCAGAC TCAGTTCAAG CACATGGATG GTAAGGATCG ACCTTCTACT
GGTGCAGAGG ATTCTGCTGT ATATGAGAAT GATGATTATA CTGAGGAATC TCAAAGCTGG
ATTAGTGGCA CGCCTACAAA GGCTGGGACT TTTGAGTGCA AAGTGTTTGC TATTAAGGAT
ACTAAGTTAG TAAGTAGCGG TGGAGGTAAA CATTTCGAAA GTTCTACAGT ATCAGACGAG
TTTAATAAAA AAGTCAAAGA TGATGCAGGT AAGAAGTCCC TGTTTGAGGG AAACATTGTT
GAAGATAAGT GGGACAATAA GGCGGATATT CAACAAGGTG TTGACTGGGA TTATAAGACT
GTAAAAATCC AAGTTGGAGA TGATGATAAG CTTGCGCTTA ATGTTTATCC TTTTAAGGGC
TCTAATGCGT TGACTAGCAA GAATAACAAG ATTTCTGCGA TGCTCGGTAT GGAGCTTAAG
CCGTTTGTTG ATGCTACTTC TGCGGCGGAT AGCGCGAATA AGATTACATT GCGCGTGCTC
TGCTCGAAGG GCAAGAAGAA GGATTCTGGC TCGCGATCTG AGCAACCCTC TGAACCGTCG
CAACCGTCTC AAACTGCTGG ATCGCCGCAA GCTGAGGAGC CTCTTGTATA CAAAACTTGG
AGCAGTAATC TTGCCGAGCT TGGTCTGAGT GTGCCTGAGG ATACGAAGCA AACTAGATGC
AATAAGGCAA ATGATGGGGA TAAAGAATGT ACTGCGGATA AAGTTGCATC TCAAGCTTCT
ATGGAAGTGA CCTTGAAGCC TACTGCTGTT GGCAATTACC AGTGCGTTGT GTACGCGCTA
AAGCCTAAAG CACTCACTAC GTTTGATGAT GCAATAAAAA ATACTAAGGC TGACAGTCTA
ACTCCTGATT CAATAAAATC TGCTCTAACT GCTGCTCCAG CATCTTTTAA AGAACATAAG
GATTTTGCTG CTTTTACGCT CAATATTGAT TCGGTGAGCA ATTTTACTTT GCCGCACACG
GGCGGTCAGA GTTGGAATTT GCAGCTGGGT ATTCTTGCAG CGCTACTGGT GAATCTGCTG
GCTGCTGGCT TTGTGGTAAG TCAAAATGAG CGCGGTCGCA AATTAATTTT GGGAAGGTGG
CGAGGCTTAT GCAATCACGT ATAA
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| Protein sequence | MFNSHIFSRF LRLVRSIRRS LFAFFVAITM LLATFVIAPT YALSAGENTT VTEKVEGAKS
GSAKNDDENK QQTKQSESIN TEPNKKNTDT SSTLNKDNKE SKPVEKQQNA DVSVDKAKSE
TAVNKKAKDA KNKAADSTKA VKGTDRGANE DPQLPKECKG KKSLSSCYKI SYNIGSPTVD
NDGKTILIKR GETRTITPEF KLRKTRKQTG VPGGLWFTLE KDGEDPVPSW ANFEKDNGAT
KVKDTSKDKT GFDGSVTLRP GKWDRGSYTF KIGIYHPTDT KGEKIDVSVK IDESDISKND
LSLSLYDFRK ENDKVPVSDD KIIIKQKSKA ITNKLFIDSQ SKEEPGYIHH HMICHKETST
NGSAETSDSA DSYTLDSVNG LSLGTQTQFK HMDGKDRPST GAEDSAVYEN DDYTEESQSW
ISGTPTKAGT FECKVFAIKD TKLVSSGGGK HFESSTVSDE FNKKVKDDAG KKSLFEGNIV
EDKWDNKADI QQGVDWDYKT VKIQVGDDDK LALNVYPFKG SNALTSKNNK ISAMLGMELK
PFVDATSAAD SANKITLRVL CSKGKKKDSG SRSEQPSEPS QPSQTAGSPQ AEEPLVYKTW
SSNLAELGLS VPEDTKQTRC NKANDGDKEC TADKVASQAS MEVTLKPTAV GNYQCVVYAL
KPKALTTFDD AIKNTKADSL TPDSIKSALT AAPASFKEHK DFAAFTLNID SVSNFTLPHT
GGQSWNLQLG ILAALLVNLL AAGFVVSQNE RGRKLILGRW RGLCNHV
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