| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1213 |
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| Symbol | |
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| ID | 8709683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1440069 |
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| End bp | 1441436 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 646483301 |
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| Product | hypothetical protein |
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| Protein accession | YP_003374407 |
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| Protein GI | 283783653 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1373] Predicted ATPase (AAA+ superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000000707521 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGTTAAGGC GAAAATTTTA TCAAAAAATG CTCGATTGGA AGAATGCTGA TCGCGGTTCA
ACAGCGCTTT TAGTAACAGG TGCTCGAAGA GTTGGGAAAA GTACTATAGT TGAAGAGTTT
GCAAGAAACG AATACAAGTC TTATATTCTT ATTAATTTTT CGCAAGCATC AAAAGATGCG
CTTCGGCTAT TTGAAGATTA TCGTTCAGAT TTAAGCACTT TCTTTACATA CATATCTGCA
CTATATGGTG TGAAACTTTA TAACCGTGAA TCGGTAATGG TTTTTGACGA AGTGCAATTT
TTCCCACAGG CTAGAGAATT TGTAAAACAA CTAGTTGCAG ATGGCAGATA CGACTATATA
GAGACTGGCT CGTTATTGTC TATTAAACAC AATGTTGAAA CAATATTGAT TCCATCTGAA
GAACAAGAAG AACGCATGTA TCCTCTTGAT TTTGAAGAAT TTTTGTGGGC TTTTGGAGAA
GAAAATCTAT CGAAAGTTAT TAAAGATTCA TTTGATGAGT TAAATCCTTT GCCAGATGTT
TTACATAAAA AAGCGATGCG ACTTTTTAGA GAATATATGC TAGTTGGTGG CATGCCGCAG
TCTGTAAATG AATATGTTGA TTCGAGAGAT TTTGCTCGAG TAGATAGGGT TAAGCGTCGT
ATTCTTTCGC TCTATAGGCA GGATGCTGCA AAGTTTGCAA AAGGTTATGA AATGAAAGTT
ATGTCTGTGT TTGATGGAAT ACCAGCACAG CTTTCCAGAC ATGAAAAAAG ATATAGGATT
ACTTCCTTAG GTAAGAATGC TCGTATGCGT GACTATAAGG ATGCGTTTTT TTGGCTTTCG
GATGCGAGTA TTACAAATAA TTGCTACAAA TCTACAGATC CAAATGTGGG ATTGAATCTT
AATGCAGATG ATGCGTTAGT AAAATGTTAT ATGGCTGATA CCGGTTTGTT GACTTCTATG
ATACTTTCAG ATAGTAGTAT TGCGTCTAAT GATCTGTATA AAGAAATTTT ATTTGGAAAA
ATCTCAATTA ATGAAGGAAT GCTAGTTGAA AACGTTGTTG CGCAACAGCT AATAGCATCT
GGACATCGCC TATTCTTCTA TTCAAATAGA GACAAAGAAA ATTCGGAAAA TACTATGGAA
ATAGATTTTT TGATTTCTAA AGCTTTTCAG GATTCTGCTG GCAAAATGCG TATATCTCCT
ATTGAAGTTA AATCTGGGAA TGTGTTTAAA ACAGTTTCTC TTGATAAATT TAAGAACAAG
TTTTCAAAAA GAATTGGAAC TAGTTATGTA TTTGCTCCTA AACAGCTTAG CGTTAGAAAA
GATTTGAATC TCGTAATATT ACCACTTTAT ATGTGTGGAT TGGTGTAG
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| Protein sequence | MLRRKFYQKM LDWKNADRGS TALLVTGARR VGKSTIVEEF ARNEYKSYIL INFSQASKDA
LRLFEDYRSD LSTFFTYISA LYGVKLYNRE SVMVFDEVQF FPQAREFVKQ LVADGRYDYI
ETGSLLSIKH NVETILIPSE EQEERMYPLD FEEFLWAFGE ENLSKVIKDS FDELNPLPDV
LHKKAMRLFR EYMLVGGMPQ SVNEYVDSRD FARVDRVKRR ILSLYRQDAA KFAKGYEMKV
MSVFDGIPAQ LSRHEKRYRI TSLGKNARMR DYKDAFFWLS DASITNNCYK STDPNVGLNL
NADDALVKCY MADTGLLTSM ILSDSSIASN DLYKEILFGK ISINEGMLVE NVVAQQLIAS
GHRLFFYSNR DKENSENTME IDFLISKAFQ DSAGKMRISP IEVKSGNVFK TVSLDKFKNK
FSKRIGTSYV FAPKQLSVRK DLNLVILPLY MCGLV
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