| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1146 |
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| Symbol | |
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| ID | 8709326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1323742 |
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| End bp | 1324719 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646483237 |
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| Product | hypothetical protein |
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| Protein accession | YP_003374345 |
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| Protein GI | 283783591 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGTTT GTTCTCAATG TGGTACAGCA AACAACGATT CCGCAAAGTT CTGTAAGGGT
TGCGGTAATA ATGTTGAAGC CGCTCAACCA GTAGCTCAAC CAGTAGCTCA GCCTGTACAA
CCTGTGTCTC AGGCTCAGCC AATGGCTCAA CCAATGCAGC CAATGCAACC TGTGTCCCAG
CAGCCAGCTC AGCCAATGTT TGTTCAGCAG AATCCGCAAA TGACTCACCC AACTCAGCCA
GCTCAACCGA TGATGCAGCA GGCTCCAGCA ATGCAAGGTG CTCCTCACTA TACTCAGCCA
ACGAATCAGA TTAATTCTGA ACAGATGGTG GACTTCTTCC ATTGGCTTAT TAGTGCAATT
AAGAAGCCTT CTCAGCAGTA CCATGTATCT AGCTTGTACG CTGTGCTTGT GTTTGTAATT
AGCGCTCTTG TATCTGCAAT CCAAACTTAT TTCACGGTTC AATCTGGTGT CAACATTTTC
AACTCTTTTA CTGATGCTGG TGCTAACTTC CTTTCGTCAA TGTCGGAGCG TTCTATTTCT
GCTCCACGAG TTTCCGTGCC TATTTCTGTA TTCATTGCCG CTTTCTTCGC AGCAATGATT
AGCGTTTACA TGACATTCGT TGTGGCTTTG ATTGGTGCAA AGATGTTTGG TGACCCAATG
TCTGCCAGCC AGTTGCATGT TCAGTTCGCT CAGAAGATGG TTCCGATTGT AACAATTCAG
ATTTGCGCAG CATTGCTTGG CATTCTTACT CTTTCGACTC CGTCTGTGTT CTTGCAAATC
TTTGCAGGAT TCTTGACAAT GCTTCTTCCA TTCTCCTTCG TATCTCACGC TGAATGCACG
CGTAAGATAG ATCGCGAATG GTTGTGGGTT ATTTACGTGT TGGTGGCTGC GATAATTCTT
ATTATCGTAT TCTTCGTCAC CATGGGAATC GTAACAAGTG CTATTTCTTC CGCAATATAC
GGAGCTTTAT TGCACTAA
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| Protein sequence | MKVCSQCGTA NNDSAKFCKG CGNNVEAAQP VAQPVAQPVQ PVSQAQPMAQ PMQPMQPVSQ
QPAQPMFVQQ NPQMTHPTQP AQPMMQQAPA MQGAPHYTQP TNQINSEQMV DFFHWLISAI
KKPSQQYHVS SLYAVLVFVI SALVSAIQTY FTVQSGVNIF NSFTDAGANF LSSMSERSIS
APRVSVPISV FIAAFFAAMI SVYMTFVVAL IGAKMFGDPM SASQLHVQFA QKMVPIVTIQ
ICAALLGILT LSTPSVFLQI FAGFLTMLLP FSFVSHAECT RKIDREWLWV IYVLVAAIIL
IIVFFVTMGI VTSAISSAIY GALLH
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