| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1091 |
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| Symbol | |
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| ID | 8709408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 1255632 |
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| End bp | 1256441 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 646483182 |
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| Product | RelA/SpoT domain protein |
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| Protein accession | YP_003374292 |
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| Protein GI | 283783538 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2357] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATACTTG ATCGTCATAA CCGCGTAAAC GCAGCAGAAC TCTATGCGCG TCTTCATAGC
AACGAAGCAG CTAATGAAAG CAGCAACGTT AGCAGCAATG TTGACAATAC AAAAAACCAA
CAAAATTGCT CCCAATGCGG CAAAACTAAT TCGCTTATGC TTCCTGAAGA CCAAATCGAC
GAATTTGTAA ACATGATGCA AATTTACGAA GGAGCAATGT ACGAAATAAG TACAAAGCTC
GAGATTCTAG ATAGCGAATT TCAGGTGCGG TTCTCTCACG ACCCAATTCA TCACATGGAG
CGTCGTCTTA AATCAGTACA CTCAATTTTT GAGAAACTGC AAAGGCGTCA TCTAGATATT
TCCACACGCT CTATACGCGA TAATCTTTTC GACGTAGCTG GAATTCGCGT AATTTGCAAC
TACTGCGACG ATGTGTATTC TGTAGCGCAA TATCTTTCTA AACAAACAGA CATTCAAGTA
TTGCAAGTTA AGGATTATAT TAAGAATCCA AAACCTAATG GATACCGCAG TTTGCACGTA
ATTTATGCAG TTCCTGTGTT CTTGTCTTCT GGAGCACACT ACACGCCAGT TGAAGTGCAA
TTCCGAACTA TTGCTATGGA TTATTGGGCT AGCTTGGAGC ACGCTTTAAG ATACAAAGCC
GGTTTGCCGG ATGCAAAGTT GGCTGAGCAC TCTCAAACTT TGCTCGATTG CGCGCATAGC
TTGCAAAATA TTGAAACACA AATGCAAGGT ATTCACCGCG ATATTAATGG TGCTCCTCAA
GTTGAAGAAG CACCTAATAG TAAGGCATAA
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| Protein sequence | MILDRHNRVN AAELYARLHS NEAANESSNV SSNVDNTKNQ QNCSQCGKTN SLMLPEDQID
EFVNMMQIYE GAMYEISTKL EILDSEFQVR FSHDPIHHME RRLKSVHSIF EKLQRRHLDI
STRSIRDNLF DVAGIRVICN YCDDVYSVAQ YLSKQTDIQV LQVKDYIKNP KPNGYRSLHV
IYAVPVFLSS GAHYTPVEVQ FRTIAMDYWA SLEHALRYKA GLPDAKLAEH SQTLLDCAHS
LQNIETQMQG IHRDINGAPQ VEEAPNSKA
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